| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0490 |
|---|
| Symbol | cysZ |
|---|
| ID | 5135328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | - |
|---|
| Start bp | 523985 |
|---|
| End bp | 524737 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640531948 |
|---|
| Product | putative sulfate transport protein CysZ |
|---|
| Protein accession | YP_001216441 |
|---|
| Protein GI | 147673993 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2981] Uncharacterized protein involved in cysteine biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000000000555073 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATCA GCTCACGTTC CGGGTTCGGC TACTTCTCTT ACGGCATACG TTTGGCTTTA
ACGCCAGGCA TACGTCGGTT CGTTGTTCTT CCGCTACTGG CTAACATCAT CTTAGTCGGC
GGTGCTATGT ACTACTTATT CAGCCATTTA GACACTTGGA TCAGCGAGTG GATAGGACAA
TTACCTTCGT TTCTCTCTTG GCTAAGTTAT GTACTTTGGC CGCTGTTAGC ATTAACCATT
CTCGCTACTT TCTCCTATTT TTTTAGTACC TTAGCCAACT TTATTGCCTC GCCATTTAAT
GGTCTATTGG CCGAAAAGGT GGAGCAGCAT CTATCAGGTG AACGCATCGG TGAGGAAGGC
GTCTGGGCAC TGGTCAAAGA CGTTCCTCGA ATCCTTAGTC GAGAATGGCG GAAACTGCTT
TACGTGCTTC CCAAAGCACT TGGCTTATTC CTGCTATTAC TGATCCCAGC ACTTGGGCAA
ACCTTAGGCC CTATTGCTTG GTTCCTGTTC ACGGCTTGGA TGTTGGCTAT ACAGTATTGC
GACTATCCCT TCGATAACCA CAAAATCAGC TTCCATGACA TGCGTAACAC TTTGAAACAA
AATCAAAGTA AGGCCTATGG ATTTGGTATG CTGGTCGCTT TTTTCACGAG CATTCCGATT
GTGAACCTCT TCATCGTCCC AGTTGCCGTG TGTGGCGCGA CGGCGATGTG GGTGATGGAA
TTTAAGACAC AACACTCCCC TCTGCGCCAA TAA
|
|---|
| Protein sequence | MQISSRSGFG YFSYGIRLAL TPGIRRFVVL PLLANIILVG GAMYYLFSHL DTWISEWIGQ
LPSFLSWLSY VLWPLLALTI LATFSYFFST LANFIASPFN GLLAEKVEQH LSGERIGEEG
VWALVKDVPR ILSREWRKLL YVLPKALGLF LLLLIPALGQ TLGPIAWFLF TAWMLAIQYC
DYPFDNHKIS FHDMRNTLKQ NQSKAYGFGM LVAFFTSIPI VNLFIVPVAV CGATAMWVME
FKTQHSPLRQ
|
|---|
| |