| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0488 |
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| Symbol | ptsH |
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| ID | 5137425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 522339 |
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| End bp | 522596 |
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| Gene Length | 258 bp |
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| Protein Length | 85 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640531946 |
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| Product | phosphocarrier protein HPr |
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| Protein accession | YP_001216439 |
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| Protein GI | 147673947 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
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| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000000038902 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACGAGA AGCAAGTAGA AATCACTGCA GAAAACGGCC TTCACACTCG TCCTGCTGCA
CAGTTTGTTA AAGAAGCAAA AGCCTTCGAT GCAGACATCA CTGTGACTTC TAACGGTAAA
AGTGCAAGCG CGAAAAGTCT GTTCAAGCTG CAAACGCTAG GTCTGGTAAA AGGTACTGTC
GTGACTATCT CTGCCGAAGG CCCTCAGGCA AAAGAAGCTG TTGAGCACCT AGTTGCTCTG
ATGGACCAAC TTCACTAA
|
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| Protein sequence | MYEKQVEITA ENGLHTRPAA QFVKEAKAFD ADITVTSNGK SASAKSLFKL QTLGLVKGTV
VTISAEGPQA KEAVEHLVAL MDQLH
|
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