Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0486 |
Symbol | crr |
ID | 5136645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 519866 |
End bp | 520375 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640531944 |
Product | PTS system glucose-specific transporter subunit |
Protein accession | YP_001216437 |
Protein GI | 147673335 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2190] Phosphotransferase system IIA components |
TIGRFAM ID | [TIGR00830] PTS system, glucose subfamily, IIA component |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000000000175128 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGTCTGT TTGACAAACT TAAGAAGCTA GTCTCTGACG ACAGCGCTAA CGCAGGTGCA ATCGACATCA TCGCACCTCT TTCTGGTGAA ATTGTAAACA TCGAAGATGT ACCAGATGTG GTTTTCGCTG AGAAAATCGT TGGCGACGGT ATCGCGATCA AGCCTGCTGG TAACAAAATG GTAGCTCCTG TTAACGGTAC TATCGGCAAA ATCTTCGAAA CCAACCACGC GTTTTCTATC GAATCAGATG AAGGCGTTGA GCTGTTTGTT CACTTCGGTA TCGACACGGT TGAGCTGAAA GGTGAAGGCT TCAAGCGTAT TGCAGAAGAA GGCCAATCAG TGAAAATCGG CGATACTATC ATCGAATTCG ATTTGGCACT GCTCGAAGAG AAAGCGAAAT CAACTCTGAC TCCTGTTGTT ATCTCTAACA TGGATGAAAT CAAAGAGCTG AACAAACTTT CTGGTTCAGT GACCGTAGGT GAAACACCGA TCCTACGCGT GACCAAGTAA
|
Protein sequence | MGLFDKLKKL VSDDSANAGA IDIIAPLSGE IVNIEDVPDV VFAEKIVGDG IAIKPAGNKM VAPVNGTIGK IFETNHAFSI ESDEGVELFV HFGIDTVELK GEGFKRIAEE GQSVKIGDTI IEFDLALLEE KAKSTLTPVV ISNMDEIKEL NKLSGSVTVG ETPILRVTK
|
| |