| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0484 |
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| Symbol | |
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| ID | 5135437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 516900 |
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| End bp | 518324 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531942 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_001216435 |
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| Protein GI | 147675479 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000105841 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGA AACTGCTAAT TAAAACTTGG GGCTGCCAGA TGAACGAGTA CGATTCATCG
AAAATGGCTG ACCTGCTTAA TGCTGCAAAC GGCTATGAGC TGACAGAGAT ACCCGAGGAA
GCTGACGTTT TACTCCTAAA CACCTGTTCG ATTCGTGAAA AGGCGCAGGA AAAAGTCTTC
CACCAACTCG GCCGTTGGAA AACCCTGAAA GACAAAAAAC CCGGAGTCGT GATCGGTGTT
GGTGGCTGTG TTGCCACTCA AGAAGGTGAC TCGATTCGCG ATCGTGCACC TTATGTGGAT
GTCATCTTCG GCCCACAGAC ACTTCATCGT CTGCCTGAAA TGATTAAACA ATCGCAAACC
AGCGACGCGC CCGTGATGGA TATCTCTTTC CCTGAGATTG AAAAATTCGA CCGCCTGCCT
GAGCCACGTG CGGAAGGCCC AACTGCGTTC GTTTCTATCA TGGAAGGCTG CTCAAAATAC
TGTACTTACT GCGTAGTGCC TTACACTCGT GGTGAAGAAG TCAGCCGTCC TATGGACGAT
GTCCTGTTCG AGATCGCTCA GCTTGCCGAG CAAGGGGTGC GTGAAGTTAA CCTGCTGGGT
CAAAACGTCA ACGCTTACCG TGGTGCCACT CACGATGGCG GCATTTGCTC TTTCGCTGAA
TTACTGCGTT TGGTCGCCAC CATTGACGGC ATCGATCGTA TCCGCTTTAC CACTAGCCAC
CCACTCGAAT TTACGGATGA CATTATTGCA GTGTACGAAG ACACGCCTGA GCTCGTGAGC
TTCCTGCACT TGCCAGTACA AAGTGGGAGC GATCGCATTC TGACTATGAT GAAGCGTCCA
CATACGGCGA TTGAGTACAA ATCCATCATC CGTAAGCTAC GTAAAGCGCG CCCAGATATT
CAAATCAGCT CTGATTTTAT CGTTGGCTTC CCTGGGGAAA CCGACAAAGA TTTCCAAGAC
ACCATGAAGC TGATCCGCGA TGTCGATTTC GACATGAGCT TTAGCTTTAT TTTCTCACCT
CGTCCAGGCA CACCCGCCGC TGACTATCCT TGCGATCTGT CGGAAGAAGT GAAGAAAGAA
CGCCTGTACG AACTGCAGCA GCAGATCAAC AGCCAAGCTA TGCGTTATTC ACGCCTGATG
CTGGGTACTG AACAGCGTAT TTTGGTTGAA GGTCCATCGA AAAAAGATCT GATGGAGCTG
CGTGGCCGTA CTGAAAATAA CCGTGTAGTG AACTTCGAAG GCTCACCGGA TCTGATCGGT
CAATTTGTTG ATGTGAAGAT CGTCGACGTT TTCCCGAACT CACTGCGCGG TGAACTGCTG
CGTACCGAAC AAGAGATGAA TCTGCGTATC GCGACCTCTC CCTCTGAAAT GAAAGCGAAG
ACTCGCCGCG AGGATGAGCT TGGGGTTGCT ACATTTACTC CTTAA
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| Protein sequence | MSKKLLIKTW GCQMNEYDSS KMADLLNAAN GYELTEIPEE ADVLLLNTCS IREKAQEKVF
HQLGRWKTLK DKKPGVVIGV GGCVATQEGD SIRDRAPYVD VIFGPQTLHR LPEMIKQSQT
SDAPVMDISF PEIEKFDRLP EPRAEGPTAF VSIMEGCSKY CTYCVVPYTR GEEVSRPMDD
VLFEIAQLAE QGVREVNLLG QNVNAYRGAT HDGGICSFAE LLRLVATIDG IDRIRFTTSH
PLEFTDDIIA VYEDTPELVS FLHLPVQSGS DRILTMMKRP HTAIEYKSII RKLRKARPDI
QISSDFIVGF PGETDKDFQD TMKLIRDVDF DMSFSFIFSP RPGTPAADYP CDLSEEVKKE
RLYELQQQIN SQAMRYSRLM LGTEQRILVE GPSKKDLMEL RGRTENNRVV NFEGSPDLIG
QFVDVKIVDV FPNSLRGELL RTEQEMNLRI ATSPSEMKAK TRREDELGVA TFTP
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