Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0480 |
Symbol | lnt |
ID | 5137784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 512765 |
End bp | 514282 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640531938 |
Product | apolipoprotein N-acyltransferase |
Protein accession | YP_001216431 |
Protein GI | 147675422 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0815] Apolipoprotein N-acyltransferase |
TIGRFAM ID | [TIGR00546] apolipoprotein N-acyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0772251 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACAGCG TATTATCTCA TCGCCTAATG CGGCCGCTTA CGGCCGCTTT TGTTGGCGTC ATAACTCCTC TGGCTTTTGC CCCGTATCAA TTTTGGCCTT TGGCTCTACT CAGCCCATTT ATCCTACTGC TTTTGCTCCA CCAACAAAGC GCCAAGCGAG CGGCTTTGAT TGCTTATCTC TGGGGGATTG GTCAATTTGC GGTGGGTATC AGTTGGGTAC ACGTCAGTAT TGATACGTTT GGCGGCATGC CCAAAATTGC CAGCCTGTTT TTAATGACTC TATTGGTCGG CTATCTGGCA CTTTATCCAA GCCTTTTCGG CTGGCTACTC AATCGCTTTT TTCCGAACAA CTCACGCAGT AAATGGTTAT GTGCTGCCCC AGCTTTGTGG CTGATTACCG ATTGGCTACG TGGTTGGGTG ATGACGGGTT TTCCTTGGCT ATGGCTCGGT TACAGTCAAA TTGATAGCCC TCTTGCCAAC TTTGCCCCCG TCGGTGGCGT AGAGCTCATC ACTCTGTTAC TGCTGTTTTG TGCTGGTAGC TTAGCTTATG CAGTGCTTAA TCACCGTTGG TTGATGGCTT GCATCCCTCT TGTGGTTTAC GCAACGGGTT ATGGCCTCCA AGCCATGCAG TGGGTCACCC CACAAACGGA TCGCACAGCC TCACTGGCCT TGATTCAAGG CAATATCGAA CAGGGATTGA AATGGCTGCC TAGCCAGCGC TGGCCAACCA TCATGAAATA CACCGATCTT ACTCGCGAAA ACTGGGATGC CGATGTAATC ATTTGGCCAG AAGCGGCGAT CCCCGCTTTT GAATATGAAA TCTCCTCATT TCTGCATAAT CTTGATGCTG CGGCACGTAT GAACCAAAGC GCGGTGATTA CTGGCATCAT CAATCAAAGT GAAGATAAGC AGTACTTCAA TAGCGTGCTG ACAGTCGGTG ATACGCCTCA TGGCGAATAC CGTTATGATC TGACCCTGCG CTACCATAAG TACCACTTGT TGCCTTTTGG CGAATTCGTG CCGTTTGAAG AGATCCTGCG TCCATTAGCT CCATTCTTTA ATTTGCCGAT GTCCTCCTTT AGCCAAGGGG CTTACGTGCA ACCGAATTTG ATTGCAAAGG GCTTCGCATT TGTCACCGCA CTCTGCTACG AAATCATCTT CAATGAGCAA GTACGCGATA ATGTGACGCC GGAAACCGAC TTCCTACTGA CGCTTTCGAA TGATGCTTGG TTTGGTCGTT CGATAGGCCC ATTGCAACAC ATGGAAATCG CTCGCATGCG CGCCTTAGAA TTGGGCAAGC CGCTGATCCG CGCCACCAAC AATGGAGTGA CGGCCGTCAC TGACGAGCGA GGACGCATCG TAGCTCAGTT GCCACAATTT GAAACTGGCG TGCTAAAAGC AACGGTCACC CCAACTCGCG GTAGTACACC TTACTTCCTA TGGGGCACAA CGCCACTCTA CCTCTGGGTA GGCTTAGCGA TTGGGTTCGC TTTCTGGCGC CAGCGCCGGG CTAGATAA
|
Protein sequence | MNSVLSHRLM RPLTAAFVGV ITPLAFAPYQ FWPLALLSPF ILLLLLHQQS AKRAALIAYL WGIGQFAVGI SWVHVSIDTF GGMPKIASLF LMTLLVGYLA LYPSLFGWLL NRFFPNNSRS KWLCAAPALW LITDWLRGWV MTGFPWLWLG YSQIDSPLAN FAPVGGVELI TLLLLFCAGS LAYAVLNHRW LMACIPLVVY ATGYGLQAMQ WVTPQTDRTA SLALIQGNIE QGLKWLPSQR WPTIMKYTDL TRENWDADVI IWPEAAIPAF EYEISSFLHN LDAAARMNQS AVITGIINQS EDKQYFNSVL TVGDTPHGEY RYDLTLRYHK YHLLPFGEFV PFEEILRPLA PFFNLPMSSF SQGAYVQPNL IAKGFAFVTA LCYEIIFNEQ VRDNVTPETD FLLTLSNDAW FGRSIGPLQH MEIARMRALE LGKPLIRATN NGVTAVTDER GRIVAQLPQF ETGVLKATVT PTRGSTPYFL WGTTPLYLWV GLAIGFAFWR QRRAR
|
| |