Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0468 |
Symbol | lipB |
ID | 5136983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 500486 |
End bp | 501145 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640531926 |
Product | lipoate-protein ligase B |
Protein accession | YP_001216419 |
Protein GI | 147674188 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0321] Lipoate-protein ligase B |
TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00000117999 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAATAA TGGAAAACCA GCTGTTGGTG AGACGCCTTG GCAGACAGGA CTACACTCCC GTTTGGCAGG CAATGCATCA ATTCACTGAT CAACGTGACT CCACAACGCG TGATGAAGTG TGGCTTGTCG AACACAACCC CGTGTTTACT CAAGGACAAG CCGGCAAAGC TGAGCACCTC CTCAATACTG GAGATATTCC TGTTGTACAA AGTGATCGGG GTGGGCAAGT CACCTACCAC GGACCGGGGC AATTAGTCGC CTATTTTCTG ATTGACCTAC GCCGTAAAAA GCTCGGCGTC CGTGAATTAG TGACACACAT TGAAAATTTG GTTATTCACA CCTTAAAACA TTATCAAATT GAGTCAGCCG CACGACCCGA TGCCCCCGGA GTTTACGTAC AAAATAGAAA AATCTGCTCT TTAGGTTTGC GTATCCGTAA GGGATGCTCT TTCCACGGAC TCGCACTCAA TATTCAGATG GATCTTGCTC CATTTTTACG TATTAACCCT TGTGGGTATG CTGGAATGGA GATGATTCAA TTGAGTGACC TGCATCCGGT CAGCATGGAA CAGGTTGAAA AAGTATTAAT CCAAGAACTC GTTACTCTAC TGGACTACGA GCAAGTCGAA TTCAGCACAG AAGCATACAA TCATGAGTAA
|
Protein sequence | MTIMENQLLV RRLGRQDYTP VWQAMHQFTD QRDSTTRDEV WLVEHNPVFT QGQAGKAEHL LNTGDIPVVQ SDRGGQVTYH GPGQLVAYFL IDLRRKKLGV RELVTHIENL VIHTLKHYQI ESAARPDAPG VYVQNRKICS LGLRIRKGCS FHGLALNIQM DLAPFLRINP CGYAGMEMIQ LSDLHPVSME QVEKVLIQEL VTLLDYEQVE FSTEAYNHE
|
| |