Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0451 |
Symbol | |
ID | 5136059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 479784 |
End bp | 480917 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640531909 |
Product | hypothetical protein |
Protein accession | YP_001216402 |
Protein GI | 147674949 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAATAAAG CTCGTACAGA ACAATTCGCA GGATACGATC CTTTTGATGG GCTCAATTCA AGCTGGTTCA AGCGCTTACC GATAAGCAAA GATTCGACTC TTGGTTTAGC GTGGATCCAG TTGTTCAAAC GCTCACCGAT TAATCTTCGC CCATGGCTAG GTGTGCCCAA AGCGCGAAAC CCTAAAGGCG TGGCCCTGTT TATCCTCGGA TTAATCGAAG AGTATCAAGT GACAAAAGAT CCCGCTTTGC TCACAGAAGC GGAGCAACTG GCGCAGTGGC TAGTGACTCA GCGTTGTGAT GAGCAAATCT GGCATGGTGC CTGTTGGGGA TATCATTTTG ATTGGAAAGC GCGAGCATTC TTTGTTCCTA AGGGGAAGCC GAATGTGATC ACGACAGTCT ATGTCAGTCG TGCCTTACAC CAATTGGGGC AACTGACGGG GCGAGCTGAC TGGGTCGACT TGGCGCTGCG CAGTGGTGAT TTTATTGCTG GCCATTTATT GACTCAAAAT GAGAGCGGGG AATTTTTTGC GTATATCCCC GGTGAAACGG CATTTGTACA CAACGCCAGT TTGTGGGCGG CTGCATGGCT GGCTGTGGTT GGCCGCGAAA CGTCTTGCCC TGATTACACC GAGTTGGCAT TACGCATTGC GCGTAACAGC GCTCAAGCTC AAGCTGCCGA TGGCAGTTGG GCCTATGGCA CTCGTCATCA TCATGGATTT ATTGACGGAT TTCATACGGG CTACAACTTA GAAGCGCTAC ATCTTATACG AACGACTTTA GCGACAAACG AATTTGATGA GGCGATTGCA CGCGGTTTTC ATTTTTACAA GCAGCATCTA TTTGAAGCCG ATGGAACGGC GAAGTATTAC CACAACAATC CTTATCCACT GGATCCGCAC TCAGTATCAC AGGCCATTAT TACCTTACTC AGTGTTGGTG GTGAGGAGAG TGATGTTGTT TTGGTTAAAC GAGTCATTCA GCGTGCTATT CAAACGCTAT ACATGCCTGA GCGGGATCAG TTTGTCTATC AACGTAACAA ACGTTGGGTT AACCGAATTC ACTACGCGCG CTGGACACAG GCGTGGATGT ACCTTTCATT TCGTTTTTAT TTAAGAATTA CCAATGAGGA ATAA
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Protein sequence | MNKARTEQFA GYDPFDGLNS SWFKRLPISK DSTLGLAWIQ LFKRSPINLR PWLGVPKARN PKGVALFILG LIEEYQVTKD PALLTEAEQL AQWLVTQRCD EQIWHGACWG YHFDWKARAF FVPKGKPNVI TTVYVSRALH QLGQLTGRAD WVDLALRSGD FIAGHLLTQN ESGEFFAYIP GETAFVHNAS LWAAAWLAVV GRETSCPDYT ELALRIARNS AQAQAADGSW AYGTRHHHGF IDGFHTGYNL EALHLIRTTL ATNEFDEAIA RGFHFYKQHL FEADGTAKYY HNNPYPLDPH SVSQAIITLL SVGGEESDVV LVKRVIQRAI QTLYMPERDQ FVYQRNKRWV NRIHYARWTQ AWMYLSFRFY LRITNEE
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