Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0450 |
Symbol | |
ID | 5137767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 478651 |
End bp | 479748 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640531908 |
Product | putative polysaccharide biosynthesis protein |
Protein accession | YP_001216401 |
Protein GI | 147673812 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTACCATC AAGGATGTAC AGTGAGAAAA AACATTAATC TAATGATCGC CACAGATCTG AAAGGACAAG GTGGTGTGGC AACAGTGGTC TCAACCTACG CTGATTGTGG TTTTCTAGAA GAAAACCACA TCAAGTTGAT TGCCTCACAC TCAAGTTTGG ACCACGGGCA GAAATGGCGA ATGACATTGC GCTTTATGCT TGCACTCTGC CAATTGTTGT ACTGCTTTAT GCGTTACCGA GTCGGCATAG TACATATTCA CATGTCATCA AGGGGAAGCT ATCGACGTAA GTCTGTGATT ATTCGTCTAG TTAAGCTTTT GAAAGGAAAG GTTATTCTGC ACTTACATGG CGCCGAGTTT CGTGATTTCT ATCGAGATGA GTGCAATATG GTTCAGCAAA GGCATATTCG ACACACTTTT GCTTTGGCGG ATCATGTGCT GGTTCTTTCA ACTCAATGGC TCGCATGGCT ACAAGAGGTC ATAGGTAGAA CACAAGGCGT TTCTGTTCTG TATAACGCCG TACCCAGTTT GGCTTTAGAT CGCCACCTTG CTCAACCTGG CCGTATTGCC TTCCTTGGTC GTTTGGGGAC GCGCAAAGGA GTCGGTGATT TGATTCAAGC CTTTGCGTTA GTTAAGCAGC GCTGCCCAGA AGCACAGCTG TATCTTGCTG GCGATGGTGA GATTGAAACC TATCAAGCGA TGGCTGAGCA GCTTGGCTTG AACGGGTCCG TTCACTGTTT AGGCTGGATA GCTGGCGAAG CTAAGCTCAA ATTATTGACC CAAACTGATA TTTACTGCTT ACCCAGTTAT AACGAAGGTT TTCCTATGGG CGTTATAGAA GCTATGTCGG CAGGGATTCC CGTCGTCGCA AGTCGAGCGG GCGGAATTCC TGATGCGATC AGTGATGGTG AGCAAGGTCG TTTAATTGAG GCCGGTGATG TGGTTGCTTT AGCGCAAGCA CTCGGAGATC TGATTGAACA GCGTGCCGAA AATCAACGTA TTGCGACCGC GGCGAAGCAA AAGTTTGCTG AAAACTTCTC TTTGCAAGCG GTGATCCCGC GTCTACAAAC ACTTTACGAT GAGCTTTTAA AATCATGA
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Protein sequence | MYHQGCTVRK NINLMIATDL KGQGGVATVV STYADCGFLE ENHIKLIASH SSLDHGQKWR MTLRFMLALC QLLYCFMRYR VGIVHIHMSS RGSYRRKSVI IRLVKLLKGK VILHLHGAEF RDFYRDECNM VQQRHIRHTF ALADHVLVLS TQWLAWLQEV IGRTQGVSVL YNAVPSLALD RHLAQPGRIA FLGRLGTRKG VGDLIQAFAL VKQRCPEAQL YLAGDGEIET YQAMAEQLGL NGSVHCLGWI AGEAKLKLLT QTDIYCLPSY NEGFPMGVIE AMSAGIPVVA SRAGGIPDAI SDGEQGRLIE AGDVVALAQA LGDLIEQRAE NQRIATAAKQ KFAENFSLQA VIPRLQTLYD ELLKS
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