Gene VC0395_A0441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0441 
SymbolwecB 
ID5135806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp470199 
End bp471317 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content48% 
IMG OID640531899 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_001216392 
Protein GI147674876 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.906959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAAG TTCTCATCGT ATTTGGTACG CGCCCAGAGG CAATCAAAAT GGCACCTCTG 
GTGCAGCAAC TCTGTCAAGA CAATCGTTTT GTCGCCAAGG TATGTGTAAC GGGCCAACAC
CGTGAGATGT TAGATCAGGT ATTAGAGCTG TTTTCGATTA CGCCTGATTT TGATCTCAAC
ATCATGGAGC CTGGGCAAAC ACTCAATGGC GTGACCAGCA AAATTTTGCT CGGTATGCAG
CAAGTGTTGA GTAGTGAACA GCCAGATGTG GTTTTAGTGC ATGGTGATAC CGCTACCACG
TTTGCTGCCT CTTTAGCCGC GTATTATCAA CAAATTCCGG TAGGTCATGT TGAAGCGGGT
TTGAGAACGG GCAATATCTA TTCCCCTTGG CCTGAAGAGG GCAACCGCAA ACTCACGGCC
GCACTCACGC AGTACCACTT TGCACCTACA GATACTTCGC GTGCCAATCT GCTGCAAGAA
AACTACAACG CAGAGAATAT TTTCGTCACT GGTAATACGG TGATTGATGC GTTGTTGGCT
GTGCGTGAAA AGATCCATAC CGATATGGAT CTGCAAGCCA CTCTAGAGAG TCAGTTTCCA
ATGCTTGATG CGAGCAAAAA GCTGATTCTG GTAACAGGAC ACCGCCGTGA AAGTTTTGGT
GGTGGCTTTG AGCGTATTTG CCAAGCGCTG ATCACTACCG CAGAGCAGCA TCCCGAATGC
CAAATTTTGT ATCCCGTGCA TCTCAATCCG AATGTGCGTG AACCGGTCAA TAAGCTCCTA
AAAGGTGTCA GCAATATTGT CTTGATTGAA CCGCAGCAGT ATTTGCCTTT CGTTTACTTG
ATGGATCGCG CACACATTAT TTTGACTGAC TCTGGCGGCA TTCAAGAAGA GGCGCCCTCG
CTGGGTAAGC CAGTGCTGGT GATGCGTGAA ACGACTGAGC GCCCTGAAGC GGTGGCTGCG
GGCACGGTGA AATTAGTCGG TACCAACCAA CAACAAATTT GTGATGCGTT AAGCTTACTA
CTGACTGACC CACAGGCTTA TCAAGCCATG AGTCAGGCAC ACAACCCTTA TGGGGATGGT
AAAGCCTGTC AACGTATTGC GGACATTTTA GCGAAATAG
 
Protein sequence
MKKVLIVFGT RPEAIKMAPL VQQLCQDNRF VAKVCVTGQH REMLDQVLEL FSITPDFDLN 
IMEPGQTLNG VTSKILLGMQ QVLSSEQPDV VLVHGDTATT FAASLAAYYQ QIPVGHVEAG
LRTGNIYSPW PEEGNRKLTA ALTQYHFAPT DTSRANLLQE NYNAENIFVT GNTVIDALLA
VREKIHTDMD LQATLESQFP MLDASKKLIL VTGHRRESFG GGFERICQAL ITTAEQHPEC
QILYPVHLNP NVREPVNKLL KGVSNIVLIE PQQYLPFVYL MDRAHIILTD SGGIQEEAPS
LGKPVLVMRE TTERPEAVAA GTVKLVGTNQ QQICDALSLL LTDPQAYQAM SQAHNPYGDG
KACQRIADIL AK