| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0433 |
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| Symbol | treC |
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| ID | 5136696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 462046 |
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| End bp | 463734 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640531891 |
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| Product | trehalose-6-phosphate hydrolase |
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| Protein accession | YP_001216388 |
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| Protein GI | 147673664 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02403] alpha,alpha-phosphotrehalase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000180763 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAGCT CAACCCAATC CATGCCTTGG TGGAAAACCG CTGCAATTTA TCAAATTTAT
CCGAAAAGTT TTTGCGATAG TGGCGCGAAG GGCGTGGGCG ATCTGCAAGG CATTATCAGC
AAGCTCGATT ATTTGCAAAA GCTTGGGATT GAAGCGATTT GGCTGACGCC GATTTATCAA
TCGCCTATGG TCGATAATGG GTATGACATT GCCGATTATT ACGCGATTAA TCCAGACTTT
GGCACGATGC AAGATTTCGA ACAACTGCTG AAAGAAGCCC ATCGTCGTGG TATGCGCATC
ATCATGGATA TCGTGGTTAA CCACACCTCA ACCGAACACG CTTGGTTCCA ATCTGCATTG
GGCGATCGCA ATAGCCCTTA CCGTGATTAC TATATTTGGC GTAAGCCGGT TAACGGTGGT
GTGCCGAACA ACTGGCAATC CAAATTTGGC GGGAGTGCGT GGGCGCTGGA TGAAGCGACC
GGTGAGTATT ATTTGCATCT GTTTGCCAAA GAGCAGGCCG ATTTGAACTG GGAAAATCCG
CAAGTTCGAG AAGAAGTAAA AAACATCATC GGATTTTGGG CTGAAAAAGG TGTCGATGGC
TTCCGACTTG ACGTGATTAA CCTCATTTCC AAGCAACAAG ATTTTACCAA TGATGACATC
GGTGATGGTC GTCGTTTTTA CACCGATGGC CCAAGAGTGC ATGAGTATCT GCAAGAGATC
AGCCGTGATG TTTTCCAGCG TTATGGCAGC GTAACCGTCG GCGAAATGTC TTCAACCACC
TTAGAACATT GCCAACAATA TTCTGCGCTC GATGGTCGAG AGCTTTCTAT GGTGTTTAAT
TTCCATCATT TGAAAGTCGA TTATCCGAAT GGCGAAAAGT GGACGAAAGC GCCGTTTGAT
TTTCTGCAAC TCAAGCAAAT TTTCAATCAT TGGCAAACGG GGCTGAATGG CAAAGGATGG
GGCGCGCTGT TTTGGTGTAA CCATGATCAG CCGCGAATTG TGAGCCGTTT AGGTGATGAT
CAGCAGTACC GAGTTGAGTC AGCCAAAATG CTGGCGGCCA CCATTCACCT AATGCAAGGC
ACACCTTATA TCTACCAAGG TGAAGAGATT GGAATGACCA ACCCTGGCTT TACGTCGATC
AAGCAGTATC GCGATGTGGA AAGCATCAAC ATTCACCAAA TCATGGTGCA GCAACAAGGT
GTCTCTGAAA GTGACATGCT GGCGATTTTG GCGCAAAAAT CTCGTGATAA TTCACGCACG
CCAATGCAGT GGGATGCCAG TCTCAACGCT GGATTTACTC GTGGAGAACC TTGGATTGAA
GTGGCGCATA ACTATCCTGA AATCAATGCA CAGGCCGCGT TAGAAGACCC GCATTCGGTG
TTCTATTTCT ACCGTCGTTT GCTATCGCTA CGTAAGAAAG TGGCGGTGAT TACGGACGGT
GATTACACCG ACTTGTTGCC TGAGCATAAA GAGATTTTTG CTTATCAGCG TCGTAATCAG
AAACAAGTGT TGATCTGTTT GAATAACTAT TACGGTCACG AAGCCGAATG CGTTCTGCCA
GAATTACCGC TCGATGATGC GCTCTACTTG CTAGGCAACT ATCCGGGTAT TGAATTACAG
CGCGTGTTGG CGCACCAAGT GTTACGTCCA TACGAAACAC GCATCATCCT GATTGAGTCA
CCCCTATAG
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| Protein sequence | MSSSTQSMPW WKTAAIYQIY PKSFCDSGAK GVGDLQGIIS KLDYLQKLGI EAIWLTPIYQ
SPMVDNGYDI ADYYAINPDF GTMQDFEQLL KEAHRRGMRI IMDIVVNHTS TEHAWFQSAL
GDRNSPYRDY YIWRKPVNGG VPNNWQSKFG GSAWALDEAT GEYYLHLFAK EQADLNWENP
QVREEVKNII GFWAEKGVDG FRLDVINLIS KQQDFTNDDI GDGRRFYTDG PRVHEYLQEI
SRDVFQRYGS VTVGEMSSTT LEHCQQYSAL DGRELSMVFN FHHLKVDYPN GEKWTKAPFD
FLQLKQIFNH WQTGLNGKGW GALFWCNHDQ PRIVSRLGDD QQYRVESAKM LAATIHLMQG
TPYIYQGEEI GMTNPGFTSI KQYRDVESIN IHQIMVQQQG VSESDMLAIL AQKSRDNSRT
PMQWDASLNA GFTRGEPWIE VAHNYPEINA QAALEDPHSV FYFYRRLLSL RKKVAVITDG
DYTDLLPEHK EIFAYQRRNQ KQVLICLNNY YGHEAECVLP ELPLDDALYL LGNYPGIELQ
RVLAHQVLRP YETRIILIES PL
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