| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0427 |
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| Symbol | metQ |
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| ID | 5135232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 455935 |
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| End bp | 456762 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640531885 |
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| Product | DL-methionine transporter substrate-binding subunit |
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| Protein accession | YP_001216382 |
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| Protein GI | 147673293 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
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| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACAAGG GGTTCATCAT GAAGTTTAGC CTGAAAAGTT TACTGACTAT CGCTGCTGCA
GCCTCAACCC TAATTTTGGT CGGCTGCGGT GAAAAAGCCG TAGATAACAA CAAAGTGAAA
ATTGGTGTTA TGGCGGGTGC GGAAGCACAA GTGGCAGAAG TGGCAGCCAA AGTGGCTAAA
GAAAAATACA ATCTGGATGT CGAACTGGTG ACTTTTACCG ATTACGTAAC ACCAAACGCG
GCATTGGATG ACGGTTCTAT CGATGCGAAC GCATTCCAAC ACAAACCTTA TCTGGATAAG
CAAATCGCCG ATCGTGGTTA CAAGCTAGCG ATCGTTGGCA ACACCTTTGT TTACCCGATC
GCGGGCTACT CAAAACAGAT CAAATCGGTT GATGAACTAC AAGATGGCGC GCGCATTGCG
GTTCCAAACG ATCCAACTAA CCTAGGTCGC TCACTGCTGC TGTTGCAACA ACAAGGTCTG
CTCAAACTGC GTGAAGATGT TGGCCTACTG GCAACCGTAC GTGACATCGT TGAAAATCCG
AAGAAACTTG AGATTCTCGA ATTGGATGCT GCGCAGCTAC CACGTTCACT GGATGATGTG
GCTCTGTCTA TCATCAATAC CACTTACGCG AGCTCAATCA ACCTGACCCC AGAAAAAGAT
GGCATCTTCG TTGAAAACAA AGAGTCACCT TACGTCAATA TTTTGGTTGC CCGTGAAGCA
AACGTGAACG CCGAAAACGT ACAAAACTTC AAGAAAGCCT ACCAAACCGA TGAAGTCGCT
AAAGCCGCGT CTGAAATCTT CCAAGGTGGC GCAGTAAAAG GTTGGTAA
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| Protein sequence | MNKGFIMKFS LKSLLTIAAA ASTLILVGCG EKAVDNNKVK IGVMAGAEAQ VAEVAAKVAK
EKYNLDVELV TFTDYVTPNA ALDDGSIDAN AFQHKPYLDK QIADRGYKLA IVGNTFVYPI
AGYSKQIKSV DELQDGARIA VPNDPTNLGR SLLLLQQQGL LKLREDVGLL ATVRDIVENP
KKLEILELDA AQLPRSLDDV ALSIINTTYA SSINLTPEKD GIFVENKESP YVNILVAREA
NVNAENVQNF KKAYQTDEVA KAASEIFQGG AVKGW
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