| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0415 |
|---|
| Symbol | pomA |
|---|
| ID | 5135853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 441646 |
|---|
| End bp | 442410 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640531873 |
|---|
| Product | flagellar motor protein PomA |
|---|
| Protein accession | YP_001216370 |
|---|
| Protein GI | 147674601 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1291] Flagellar motor component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0186256 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATTTAG CAACACTGGT TGGTCTTATT GGTGGCATGG CTTTCGTTAT CATGGCGATG
GTGCTAGGCG GCAGCATCAT GATGTTCGTT GACGTGGTAT CAGTTCTTAT CGTGGTCGGC
GGTTCGGTCT TCGTCGTACT CATGAAGTTC GAGATGGGGC AGTTTTTTGG TGCGGCCAAA
ATCGCTGGTA AAGCCTTTAT GTTTAAAGCT GATGCTCCCG AAGATCTGAT TGCCAAAATC
GTCGAGATGG CGGATGCCGC ACGTAAAGGT GGCTTTTTAG CGTTGGAAGA GATGGAGATC
CCCAATCCTT TCATGCAAAA AGGGATCGAC CTTTTGGTGG ACGGCCATGA TGCGGATGTG
GTGCGTGCCA CCTTGCAAAA AGATATTGTC TTGACCGATG AGCGCCACAG CAAAGGAACC
CAAGTTTTTC GCGCCTTTGG TGACGTTGCA CCCGCGATGG GGATGATCGG GACACTGGTT
GGTCTGGTTG CCATGTTATC TAACATGGAC GACCCCAAGT CAATCGGTCC TGCAATGGCG
GTTGCTTTGC TGACGACTCT GTACGGTGCG GTACTTTCCA ATATGATTTT CTTCCCGATT
GCCGACAAGC TTGCGCTGCG TCGTGATCAG GAAACCCTCA ACCGTCGTCT GATCATGGAC
GGTGTTTTAG CGATTCAAGA TGGGCAGAAC CCAAGGGTTA TCGATAGTTA TTTGAAGAAC
TACCTCAACG CAAGTAAACG TATTCTTGAT GTTGATAAAG AGTAG
|
|---|
| Protein sequence | MDLATLVGLI GGMAFVIMAM VLGGSIMMFV DVVSVLIVVG GSVFVVLMKF EMGQFFGAAK
IAGKAFMFKA DAPEDLIAKI VEMADAARKG GFLALEEMEI PNPFMQKGID LLVDGHDADV
VRATLQKDIV LTDERHSKGT QVFRAFGDVA PAMGMIGTLV GLVAMLSNMD DPKSIGPAMA
VALLTTLYGA VLSNMIFFPI ADKLALRRDQ ETLNRRLIMD GVLAIQDGQN PRVIDSYLKN
YLNASKRILD VDKE
|
|---|
| |