Gene VC0395_A0405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0405 
Symbol 
ID5135431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp433597 
End bp434046 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content54% 
IMG OID640531863 
Producthypothetical protein 
Protein accessionYP_001216360 
Protein GI147673556 
COG category[S] Function unknown 
COG ID[COG1671] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0329784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTT GGGTAGACGC CGATGCGTGT CCGAAAGTGA TCCGTGAAAC GCTGATCCGC 
GCCGCTGAGC GTACAGGCGT TGAATGTACC TTTGTCGCCA ACCATCTGAT CCCACTGCCC
AAACGCGACA ATATTCGCGC GCTACAAGTC TCTTCAGGGT TTGATATTGC CGACAATGAG
ATAGTCAGAC GCACCGAAGC GGGCGATTTG GTCATAACGG CAGATATCCC CCTCGCGGAT
GAAGTGATCA GCAAAGGTGG TTTGGCGCTC AATCCACGCG GTGAGCTCTA CACCAAAGAG
ACCATCAAAG CGCGCCTGAA TATTCGCGAT TTTATGGATA CCATGCGCGC CAGCGGCATT
CAAACCGGTG GCCCTGCCGC CCTTTCGCAG ACCGAACGGC GCGAGTTTGC CAATCATCTG
GACAGAATTT TGGCTAAGCG CACTGGGTAA
 
Protein sequence
MKIWVDADAC PKVIRETLIR AAERTGVECT FVANHLIPLP KRDNIRALQV SSGFDIADNE 
IVRRTEAGDL VITADIPLAD EVISKGGLAL NPRGELYTKE TIKARLNIRD FMDTMRASGI
QTGGPAALSQ TERREFANHL DRILAKRTG