| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0402 |
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| Symbol | rpmE2 |
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| ID | 5136187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 431365 |
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| End bp | 431622 |
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| Gene Length | 258 bp |
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| Protein Length | 85 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640531860 |
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| Product | 50S ribosomal protein L31 type B |
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| Protein accession | YP_001216357 |
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| Protein GI | 147673049 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0254] Ribosomal protein L31 |
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| TIGRFAM ID | [TIGR00105] ribosomal protein L31 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000000944485 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGCAG GCATTCATCC CGATTACCGT AAAGTGGTGT TCCACGATAC CACGGTTGAT
CACTATTTTG TAGTTGGTTC TACTTTGCAA ACCGATCGCA CTATTGAGTG GGAAGGCAAA
ACTTACCCCT ACATTACCAT CGAGGTTTCG TCAGAATCTC ACCCGTTCTA TACCGGTAAA
CAACGTGTGG TACAAAAAGA AGGTCGCGTT GCGAACTTCA CTCGTCGTTT CGGTCAGTTT
GCTAAGGAGT CAAAATGA
|
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| Protein sequence | MKAGIHPDYR KVVFHDTTVD HYFVVGSTLQ TDRTIEWEGK TYPYITIEVS SESHPFYTGK
QRVVQKEGRV ANFTRRFGQF AKESK
|
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