| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0400 |
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| Symbol | proS |
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| ID | 5136386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 428594 |
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| End bp | 430309 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640531858 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_001216355 |
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| Protein GI | 147673158 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0189539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTACCA GTAACTATCT TCTTTCCACT CTGAAGGAGA CTCCAAACGA CGCAGAAGTT
GTGAGCCATA AGCTCATGCT CCGTGCAGGT ATGATCCGTA AGCTGGCTTC AGGTCTCTAT
ACTTGGCTGC CTACTGGTCT GCGTGTACTG CGTAAAGTCG AAAACATCGT TCGCCAAGAG
ATCGATAATG CCGGTGCAAT CGAAACCTTG ATGCCGGTGG TGCAGCCGTT TGAATTGTGG
GAAGAGACTG GTCGCTCTGA AAAAATGGGC CCAGAGCTAC TGCGCTTTAC TGACCGCCAT
GAGCGTCCGT TTGTTTTAAG CCCAACTGCG GAAGAAGTGA TCACGGCGCT GGTGCGTAAT
GAGGTGAGCT CTTACAAGCA GTTGCCACTG AACTTGTATC AAATTCAAAC CAAATTCCGT
GATGAACGCC GTCCACGTTT TGGTGTGATG CGTGCCCGTG AATTCTGCAT GATGGATGCG
TACAGCTTTG ATATCGACAA AGCGGGCCTA GAAAAATCCT ACGAAGCCAT GCACGTTGCG
TATTGCAAAG CGTTTGACCG TATGGGCCTC GATTACCGCC CAGTGCTAGC GGATACTGGT
GCTATCGGTG GTAACGGCTC ACACGAATTC CACGTACTGG CAGAAAGTGG CGAAGATCTG
ATCGCCTTCT CAACCGAATC GGATTACGCA GCCAACATCG AAAAAGCCGA AGCGGTTGCA
CCGGCGATTG AGCGCCCAGC GCCTACGCAA GCGATGACCT TGGTTGATAC CCCTAACGCA
AAAACCATCG CAGAATTGGT TGAGCAGCAC GGTCTGCCTA TCGAAAAAAC GGTGAAAACC
TTATTTGTCA AAGCCTCAGA TGAAATCGAT GCGCCTATCG TTGCGCTGAT CATCCGTGGT
GACCATGAAC TGAACGAAAT CAAAGCCGAG AAACTGGCCG AAGTGGCCTC GCCGCTGGAA
ATGGCCAGCG AAGAAGAGAT TCGCGCGCTG ATCGGTGCAG GCCCTGGCTC ATTAGGCCCT
GTCGGCCTGA AACTGCCATT TATTGTTGAC CGCACCGTTG CTGTGATGAA CGATTTCGGC
GCTGGCGCAA ACATCGATGG TAAACACTAC TTCGGTATCA ACTGGGGTCG TGATGTTGAA
CTGGGTAAAG TCGAAGATCT GCGTAATGTG GTTGAAGGCG ATCCAAGCCC ATGTGGCAAA
GGCACACTGA TGCTCAAGCG CGGTATCGAA GTGGGTCACA TCTTCCAATT GGGTACCAAC
TACTCTGAAA AGATGAACTG TGGCGTACTC GATTCGAACG GTAAAAACGT CATTCTTGAG
ATGGGTTGCT ACGGTATCGG CGTCTCTCGC GTCGTCGCGG CAGCCATCGA ACAAAACCAT
GACGATTACG GCATCATTTG GCCTGATGCG ATTGCACCTT TCCAAGTGGC TATTGTGCCG
ATGAACATGC ACAAATCTGA GCGTGTTCAG CAAGCCGCTG AAAAATTGTA TGCAGAATTG
ACAGCTGCAG GCATCGAAGT GCTGTTTGAT GATCGTAAAG AGCGTCCGGG CGTCATGTTC
TCAGATATGG AGCTGATCGG CGTGCCACAC ACCATCATCA TTGGTGATCG CAGCATGGAT
GAAGGCCACT TCGAATACAA AAATCGCCGT CAAGGTGAGA AAGAAGCCGT GGCAATGGAG
TCAATCATCG ACTTTATCCA AGCCAAACTG GCCTAA
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| Protein sequence | MRTSNYLLST LKETPNDAEV VSHKLMLRAG MIRKLASGLY TWLPTGLRVL RKVENIVRQE
IDNAGAIETL MPVVQPFELW EETGRSEKMG PELLRFTDRH ERPFVLSPTA EEVITALVRN
EVSSYKQLPL NLYQIQTKFR DERRPRFGVM RAREFCMMDA YSFDIDKAGL EKSYEAMHVA
YCKAFDRMGL DYRPVLADTG AIGGNGSHEF HVLAESGEDL IAFSTESDYA ANIEKAEAVA
PAIERPAPTQ AMTLVDTPNA KTIAELVEQH GLPIEKTVKT LFVKASDEID APIVALIIRG
DHELNEIKAE KLAEVASPLE MASEEEIRAL IGAGPGSLGP VGLKLPFIVD RTVAVMNDFG
AGANIDGKHY FGINWGRDVE LGKVEDLRNV VEGDPSPCGK GTLMLKRGIE VGHIFQLGTN
YSEKMNCGVL DSNGKNVILE MGCYGIGVSR VVAAAIEQNH DDYGIIWPDA IAPFQVAIVP
MNMHKSERVQ QAAEKLYAEL TAAGIEVLFD DRKERPGVMF SDMELIGVPH TIIIGDRSMD
EGHFEYKNRR QGEKEAVAME SIIDFIQAKL A
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