| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0395 |
|---|
| Symbol | purL |
|---|
| ID | 5136680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 422589 |
|---|
| End bp | 426482 |
|---|
| Gene Length | 3894 bp |
|---|
| Protein Length | 1297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640531853 |
|---|
| Product | phosphoribosylformylglycinamidine synthase |
|---|
| Protein accession | YP_001216350 |
|---|
| Protein GI | 147673351 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
[COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain |
|---|
| TIGRFAM ID | [TIGR01735] phosphoribosylformylglycinamidine synthase, single chain form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATTT TGCGTGGCTC CCCAGCTCTT TCAGAGTTTC GTGTTAACAA GCTCCTGACC
GCGTGTCGTG AACAGCAACT GCCTGTAACC GGTATTTACG CCGAGTTTAT GCACTTTGCC
GATCTCAAGG CAGAGCTCAA TCCGCAAGAG TTGGAAAAGC TCGAAAAACT GCTCACTTAT
GGTCCAACCA TTCAAGAGCA TGAACCGCAA GGTTTACTGC TGTTGGTGAC GCCGCGCCCC
GGAACCATCT CACCTTGGTC CTCAAAAGCC ACCGATATTG CACACAACTG TGGCCTGCAT
GGCATCAAGC GCCTTGAGCG CGGTACGGCT TATTATGTTG AAGCAGAAAC GGCGCTGACC
GCAGCACAAA TCGCAACACT TGAGGCGCTG CTGCATGATC GAATGATGGA AGTCGTGTTC
GCAGAACTCA CCGATGCCCA GCAACTGTTC AGCGTAGCAG AGCCTGCGCC TATGAGTCAG
GTCGATGTAT TAGCGGGCGG TCGTCGTGCG CTTGAAGAGG CAAACGTTTC CCTTGGTCTG
GCATTGGCTG AAGATGAAAT TGATTATCTG GTTGAGAGCT TCACTAAACT GGGTCGTAAT
CCTAACGACA TTGAACTGAT GATGTTTGCA CAGGCGAACT CAGAGCACTG CCGCCACAAG
ATTTTCAACG CCGATTGGAC CATTGATGGA GTTAAGCAAG ACAAGTCACT GTTCAAAATG
ATCAAAAACA CCTTTGAACA GACGCCGGAT TATGTGCTTT CGGCTTATAA AGATAATGCC
GCAGTAATGA CGGGCTCGAC CGTTGGCCGT TTCTTCCCCG ACCCCGAGAG CCGTCAGTAC
ACTTATCACC ATGAAGATGC CCACATTCTG ATGAAAGTGG AAACGCATAA CCACCCAACG
GCGATTTCGC CTTGGCCGGG GGCTTCGACT GGTTCTGGCG GTGAAATTCG TGATGAGGGC
GCAACCGGTA TTGGCGGCAA GCCTAAAGCG GGATTGGTGG GCTTTACCAC CTCGAACTTG
CGTATTCCCG GTTTTGAACA GCCATGGGAA AGCGATTTTG GTAAGCCAAG CCGCATTGTG
AATGCGCTGG ATATCATGCT GGAAGGGCCA CTCGGCGGCG CGGCGTTCAA CAACGAATTT
GGTCGCCCGA ACCTACTTGG GTATTTCCGC ACTTATGAAG AAAAAGTGAC GTCACATGCT
GGTGAAGAGG TGCGTGGTTA TCACAAGCCG ATCATGATTG CCGGCGGTAT GGGTAACATT
CGCGCCGAGC ATATTCAGAA GAAAGAGATC CCAGTGGGGG CAAAACTGAT CGTACTCGGA
GGCCCTGCGA TGAACATCGG TCTCGGTGGT GGCGCAGCCT CTTCGATGGC TTCTGGCCAG
TCTGCTGAAG ATCTGGATTT TGCTTCTGTG CAGCGTGAAA ACCCAGAGAT GGAGCGCCGC
TGTCAGGAAG TGATTGACCG TTGTTGGCAG CTCGGTGACA AAAACCCGAT CGCCTTTATC
CACGATGTGG GCGCGGGTGG TATCTCTAAC GCTCTGCCTG AGCTGGTGAA TGACGGCGAT
CGCGGTGGTA AATTCCAGTT GCGCAACGTG CCGAATGATG AGCCGGGCAT GAGCCCATTG
GAAATCTGGT GTAATGAATC ACAAGAGCGT TATGTGCTGG CGGTTGCTGC GGAAGATATG
CCGCTGTTTG ATGCGATTTG CCAGCGTGAA CGCGCCCCTT ATGCCGTGGT AGGTGAAGCG
ACCGAAGAGC GCCATTTGAC GCTGGAAGAC AGCCACTTTG CTAACACGCC GATTGATATG
CCAATGGATA TTCTGTTGGG TAAGCCGCCG AAAATGCATC GTGAAGCGAG CACGCTGAAA
GTTTCAAGCC CAGCGCTAGA GCGTTCAGGC ATTGAGCTTA ATGAAGCGGT GGATCGCGTA
CTGCGTTTAC CGGCAGTCGC AGAAAAAACG TTCCTGATCA CCATTGGTGA CCGCTCAGTG
ACTGGCTTAG TCGCGCGGGA TCAAATGGTC GGCCCATGGC AAGTTCCCGT CGCAAACTGC
GCAGTAACGG CCGCGAGTTT TGATTCTTAC CACGGCGAAG CGATGTCTAT GGGTGAGCGT
ACCCCTGTTG CGCTGTTGGA TTTCGGTGCC TCTGCACGTT TAGCGGTCGG TGAAGCTATT
ACCAACATAG CCGCAACCGA TATTGGCGAG CTGAAACGCA TCAAACTTTC GGCGAACTGG
ATGTCTCCAG CGGGCCATCC GGGTGAAGAT GCCGGTCTGT ATGAAGCGGT GAAAGCGGTC
GGTGAAGAGC TTTGTCCTGC ACTGGGTATC ACTATCCCAG TCGGTAAAGA CTCGATGTCG
ATGAAAACCA AGTGGCAGGA AAATGGCGAG CAGAAAGAAG TGACTTCGCC GCTGTCACTC
ATCATCACCG CCTTTGCACG TGTGGAAGAC ATTCGCAAGA CCGTGACCCC ACAACTGCGT
ACTGACCTTG GTGAGACAAG CTTAATCTTG ATTGACTTGG GGAATGGTCA AAATCGTCTT
GGCGCAACCG CATTGGCGCA AGTGTACAAA CAGTTGGGTG ATAAGCCGGC TGATGTGGAT
AACGCGGCGC AGCTCAAAGG CTTTTTTGAT GCAGTACAAA CGCTGGTGCG TAACGACAAG
CTGGTGGCTT ACCACGACAA AGGTGACGGC GGTTTATTGG TGACGTTGGC AGAAATGGCT
TTCGCGGGTC ACTGTGGTAT TAAAGCCAAT ATTGAAACCT TGGGTGATGA TGCACTGGCG
GCACTGTTCA ATGAAGAGCT TGGCGCCGTG GTTCAAGTGA AAAATGATGA GCTGAATGCT
GTTCTGGCAA CACTTGCCGC CCATGGTTTA GAAGCGTGTG CTCACGTGAT TGGTGAAGTA
GAAGCATCCG ATCGTCTGCT GATCACTTGT GGTGAGGAAG TCTTGATTGA GCGCTCTCGT
ACTGAGCTTC GCACCATCTG GGCGGAAATG ACCCATAAGA TGCAAGCGCT GCGTGATAAC
TCGGCGTGTG CTGATCAAGA GTTTGCGGCC AAACAAGATA ACCGTGACCC GGGCTTGAAT
GCGAAGTTAA CTTACGATGT GCAAGCCGAC GTTGCTGCGC CGTACATCGC CAAAGGTGTG
CGTCCGAAAA TGGCGATTTT GCGTGAGCAA GGCGTCAACT CACACGTTGA GATGGCGGCA
GCGTTTGACC GCGCTGGTTT TGATGCGGTT GATGTGCATA TGAGCGACAT TCTGACTGGG
CAAACCGTGC TCGATGCTTA CCAAGGTCTG GTGGCTTGTG GTGGCTTCTC TTACGGCGAC
GTATTGGGTG CGGGCGAAGG TTGGGCGAAA TCGATTCTGT TTAACGCCCA AGCGCGTGAG
CAGTTTGAGC AGTTCTTCCA ACGTAAAGAT ACTTTCTCAC TTGGGGTGTG TAACGGCTGT
CAAATGCTGT CTAACCTGCG TGATTTGATC CCGGGTGCTG AGCTATGGCC ACGTTTTGTG
CGTAACGAAT CGGATCGTTT TGAAGCGCGC TTTAGCTTAG TCGAAGTGCA AAAATCGCCA
TCGCTGTTCT TTAGCGAGAT GGCGGGCTCA AGAATGCCGA TTGCGGTTTC TCATGGTGAA
GGTCGTGTGG AAGTGCGTGA TGCTCAGCAT CTGGCGGCAA TTGAGCAATC TGGCACCGTA
GCGATTCGTT TCGTGGATAA CTTTGGTCAG CCAACCCAAG CTTACCCAAG CAACCCGAAC
GGTTCACCGA ATGCGATTAC CGGTTTAACC ACTCAAGATG GCCGTGTGAC GATTATGATG
CCGCACCCTG AGCGTGTATT CCGTACCGTC GCCAACTCGT GGCACCCTGA TAACTGGGGT
GAGAATGGCG CTTGGATGCG TATGTTCCAG AATGCTCGTA AATATTTTGG CTAA
|
|---|
| Protein sequence | MRILRGSPAL SEFRVNKLLT ACREQQLPVT GIYAEFMHFA DLKAELNPQE LEKLEKLLTY
GPTIQEHEPQ GLLLLVTPRP GTISPWSSKA TDIAHNCGLH GIKRLERGTA YYVEAETALT
AAQIATLEAL LHDRMMEVVF AELTDAQQLF SVAEPAPMSQ VDVLAGGRRA LEEANVSLGL
ALAEDEIDYL VESFTKLGRN PNDIELMMFA QANSEHCRHK IFNADWTIDG VKQDKSLFKM
IKNTFEQTPD YVLSAYKDNA AVMTGSTVGR FFPDPESRQY TYHHEDAHIL MKVETHNHPT
AISPWPGAST GSGGEIRDEG ATGIGGKPKA GLVGFTTSNL RIPGFEQPWE SDFGKPSRIV
NALDIMLEGP LGGAAFNNEF GRPNLLGYFR TYEEKVTSHA GEEVRGYHKP IMIAGGMGNI
RAEHIQKKEI PVGAKLIVLG GPAMNIGLGG GAASSMASGQ SAEDLDFASV QRENPEMERR
CQEVIDRCWQ LGDKNPIAFI HDVGAGGISN ALPELVNDGD RGGKFQLRNV PNDEPGMSPL
EIWCNESQER YVLAVAAEDM PLFDAICQRE RAPYAVVGEA TEERHLTLED SHFANTPIDM
PMDILLGKPP KMHREASTLK VSSPALERSG IELNEAVDRV LRLPAVAEKT FLITIGDRSV
TGLVARDQMV GPWQVPVANC AVTAASFDSY HGEAMSMGER TPVALLDFGA SARLAVGEAI
TNIAATDIGE LKRIKLSANW MSPAGHPGED AGLYEAVKAV GEELCPALGI TIPVGKDSMS
MKTKWQENGE QKEVTSPLSL IITAFARVED IRKTVTPQLR TDLGETSLIL IDLGNGQNRL
GATALAQVYK QLGDKPADVD NAAQLKGFFD AVQTLVRNDK LVAYHDKGDG GLLVTLAEMA
FAGHCGIKAN IETLGDDALA ALFNEELGAV VQVKNDELNA VLATLAAHGL EACAHVIGEV
EASDRLLITC GEEVLIERSR TELRTIWAEM THKMQALRDN SACADQEFAA KQDNRDPGLN
AKLTYDVQAD VAAPYIAKGV RPKMAILREQ GVNSHVEMAA AFDRAGFDAV DVHMSDILTG
QTVLDAYQGL VACGGFSYGD VLGAGEGWAK SILFNAQARE QFEQFFQRKD TFSLGVCNGC
QMLSNLRDLI PGAELWPRFV RNESDRFEAR FSLVEVQKSP SLFFSEMAGS RMPIAVSHGE
GRVEVRDAQH LAAIEQSGTV AIRFVDNFGQ PTQAYPSNPN GSPNAITGLT TQDGRVTIMM
PHPERVFRTV ANSWHPDNWG ENGAWMRMFQ NARKYFG
|
|---|
| |