| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0384 |
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| Symbol | |
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| ID | 5135413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 414467 |
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| End bp | 414910 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640531842 |
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| Product | putative pilin |
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| Protein accession | YP_001216339 |
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| Protein GI | 147674856 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATGA TTCGAAAAAT TTTCTGCAAG CCAAGTGTGA GTCAGCAACA AGGTATGACA
TTGATCGAAT TAATGATCGC GGTAGTGATC GTGGGAGTGT TAGCGAGCAT CGCTTATCCA
GCCTATACCA ACTATGTCAA AGAAGGTCAT CGTAAACAGG CGATGGCAGA TATGGCCAAA
ATTCAGCTCT ATTTAGAGGA AAAGTATCAG AATGGCTATA CGGCGACAGG CATCGTCGAT
GCTCAAAAGG TATGTAATTC CTTTTGTAGC GTAGACAGTG ATCGTTACAA GATTGTGGTC
GAAACTGCAG CCACTAGTTA TGCGATTACA GCCACTCCGC AATCTAGTAA AGGACAAAAT
AGTGATCAAT GCGACGGTAG CGCCTACACC TCTCTCACCT TGAATGAGAA AGGTGTGACA
TCACCGATTG GGTGCTGGAA ATAA
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| Protein sequence | MEMIRKIFCK PSVSQQQGMT LIELMIAVVI VGVLASIAYP AYTNYVKEGH RKQAMADMAK
IQLYLEEKYQ NGYTATGIVD AQKVCNSFCS VDSDRYKIVV ETAATSYAIT ATPQSSKGQN
SDQCDGSAYT SLTLNEKGVT SPIGCWK
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