Gene VC0395_A0382 details

Gene Information

• Locus tag: VC0395_A0382
• Symbol: dnaK
• ID: 5137870
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 411164
• End bp: 413071
• Gene Length: 1908 bp
• Protein Length: 635 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640531840
• Product: molecular chaperone DnaK
• Protein accession: YP_001216337
• Protein GI: 147674898
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTAAAA TCATTGGTAT TGACTTAGGT ACTACAAACT CATGTGTTGC TGTGCTGGAC 
GGCGACAAGC CTCGCGTAAT TGAAAACGCA GAGGGTGAGC GTACTACTCC TTCTGTAATT 
GCATACACAG ACGGTGAAAC TCTGGTGGGT CAACCTGCGA AACGTCAAGC AGTCACTAAC 
CCACAAAACA CGCTATTTGC AATCAAGCGT CTGATCGGTC GTCGTTTTGA AGACGAAGAA 
GTTCAGCGCG ATATCAAAAT CATGCCTTAC AAAATTGTTA AGGCTGACAA CGGTGATGCT 
TGGGTTGAAG CGAAAGGCCA AAAAATGGCC GCTCCTCAAG TGTCTGCTGA AGTGCTGAAG 
AAAATGAAGA AAACCGCGGA AGATTTCCTC GGCGAACCCG TTACTGCAGC AGTTATCACT 
GTACCTGCTT ACTTTAACGA TGCTCAGCGT CAAGCAACCA AAGATGCTGG CCGTATCGCA 
GGTCTAGAAG TGAAACGTAT CATCAACGAG CCAACCGCAG CAGCTCTGGC TTATGGCCTA 
GACAAGCAAG GCGGTGATCG CACTATCGCG GTGTATGACC TTGGTGGTGG TACATTCGAT 
ATCTCTATCA TTGAGATCGA TGAAGTTGAA GGCGAGAAAA CCTTCGAAGT TCTGTCTACC 
AACGGTGACA CTCACCTAGG TGGTGAAGAT TTTGACAACC GCATGATCAA CTACCTAGTT 
GACGAGTTCA AGAAAGACCA AGGCATCGAC CTGCGTAACG ACCCGCTGGC AATGCAACGT 
CTGAAAGAAG CGGCTGAGAA AGCGAAAATC GAACTTTCTT CTGCGCAGCA AACTGACGTT 
AACCTGCCAT ACATCACCGC AGATGCGACC GGTCCTAAGC ACATGAACAT CAAAGTGACT 
CGTGCGAAAC TGGAAGCGCT GGTTGAAGAT CTGGTTCAAC GTTCTCTGGA ACCACTGAAA 
GTTGCTCTGG CGGATGCTGA TCTGTCTGTG AACGACATTA CTGACGTTAT CCTAGTCGGT 
GGTCAAACTC GTATGCCAAT GGTTCAGAAG AAAGTAGCTG AATTCTTTGG TAAAGAGCCA 
CGTAAAGACG TGAACCCAGA CGAAGCGGTA GCGGTAGGTG CTGCGGTTCA AGGCGGTGTT 
CTAGCGGGTG AAGTAAAAGA CGTTCTGCTG CTAGACGTAA CGCCTCTGTC TCTGGGTATT 
GAAACCATGG GCGGTGTGAT GACTAAACTC ATCGAGAAAA ACACCACTAT CCCAACCAAA 
GCGAACCAAG TGTTCTCTAC GGCGGAAGAT AACCAAAGCG CAGTAACCAT CCACGTACTG 
CAAGGTGAGC GTAAGCAAGC GATGTACAAC AAATCTCTGG GTCAATTTAA CCTAGAGGGC 
ATCAACCCTG CGCCACGTGG TATGCCACAA ATCGAAGTTA TCTTCGACTT GGATGCAGAC 
GGTATCCTGC ACGTTTCAGC CAAAGACAAA CAGACTGGTA AAGAGCAGAA GATCACTATC 
CAAGCTTCTG GCGGTCTGAG CGATGCTGAA ATCGAAAAAA TGGTTCAAGA AGCTGAAGCG 
AACAAAGAAG CGGACAAAAA GTTCGAAGAG TTAGCGACTG CGCGTAACCA AGCAGACCAG 
ATGATCCACG CAACTCGCAA ACAAATCACA GAAGCAGGCG AAGCACTGCC AGCGGATGAG 
AAAGCGAAGA TCGAAACGGC GATCAACGAG CTAGAAACAG CGAAAAAAGG CGAAGACAAA 
GCGGAAATCG ATGCCAAAGT GCAAGCACTG ATGGCGGCGG CACAGAAGCT GATGGAAATC 
GCACAGCAAC AAGCTCAAGC ACAAGGTGCA AACGCGGGTC AATCTTCAGC TAAAGAAGAT 
GACGTAGTGG ACGCTGAGTT TGAAGAAGTT AACGACGATA AGAAGTAA 

 

Protein sequence

MGKIIGIDLG TTNSCVAVLD GDKPRVIENA EGERTTPSVI AYTDGETLVG QPAKRQAVTN 
PQNTLFAIKR LIGRRFEDEE VQRDIKIMPY KIVKADNGDA WVEAKGQKMA APQVSAEVLK 
KMKKTAEDFL GEPVTAAVIT VPAYFNDAQR QATKDAGRIA GLEVKRIINE PTAAALAYGL 
DKQGGDRTIA VYDLGGGTFD ISIIEIDEVE GEKTFEVLST NGDTHLGGED FDNRMINYLV 
DEFKKDQGID LRNDPLAMQR LKEAAEKAKI ELSSAQQTDV NLPYITADAT GPKHMNIKVT 
RAKLEALVED LVQRSLEPLK VALADADLSV NDITDVILVG GQTRMPMVQK KVAEFFGKEP 
RKDVNPDEAV AVGAAVQGGV LAGEVKDVLL LDVTPLSLGI ETMGGVMTKL IEKNTTIPTK 
ANQVFSTAED NQSAVTIHVL QGERKQAMYN KSLGQFNLEG INPAPRGMPQ IEVIFDLDAD 
GILHVSAKDK QTGKEQKITI QASGGLSDAE IEKMVQEAEA NKEADKKFEE LATARNQADQ 
MIHATRKQIT EAGEALPADE KAKIETAINE LETAKKGEDK AEIDAKVQAL MAAAQKLMEI 
AQQQAQAQGA NAGQSSAKED DVVDAEFEEV NDDKK