Gene VC0395_A0375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0375 
Symbol 
ID5137177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp406130 
End bp406570 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content48% 
IMG OID640531833 
Producthypothetical protein 
Protein accessionYP_001216330 
Protein GI147674875 
COG category[I] Lipid transport and metabolism 
COG ID[COG2867] Oligoketide cyclase/lipid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.66148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAATGA AACAAGTGAG TCGTTCTGCC TTGGTCTCGT TTAGTGCAGA GCAGATGTTT 
CATTTGGTCA ATGATGTGGC GCGTTATCCT GAGTTTTTGC CCGGTTGTTC GGGTTCTTGT
GTGCTGGAGC AGAGTGAGGC ACATATGGTG GCATCGGTGG ATGTTTCAAA AGCGGGGATC
AGTAAGACGT TTACCACCTC GAATCAATTG ACGCCCGGGG TGTCGATTGC CATGAGCTTG
GTGGATGGGC CTTTTAAAAC GCTGCGCGGT GGATGGTTTT TCACTCCGTT GGATGAAGCC
GCGTGTAAAG TTGAGCTGCG TTTGGAGTTT GAGTTTTCCA GCAAAATGAT TGAGTTGGCG
TTTGGCAAAA TTTTTAATGA ATTGACCAGC AATATGGTGA ATGCGTTTAC TCGCCGAGCA
AAACAGGTGT ATGGAGAGTG A
 
Protein sequence
MKMKQVSRSA LVSFSAEQMF HLVNDVARYP EFLPGCSGSC VLEQSEAHMV ASVDVSKAGI 
SKTFTTSNQL TPGVSIAMSL VDGPFKTLRG GWFFTPLDEA ACKVELRLEF EFSSKMIELA
FGKIFNELTS NMVNAFTRRA KQVYGE