Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0375 |
Symbol | |
ID | 5137177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 406130 |
End bp | 406570 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640531833 |
Product | hypothetical protein |
Protein accession | YP_001216330 |
Protein GI | 147674875 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2867] Oligoketide cyclase/lipid transport protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.66148 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAAATGA AACAAGTGAG TCGTTCTGCC TTGGTCTCGT TTAGTGCAGA GCAGATGTTT CATTTGGTCA ATGATGTGGC GCGTTATCCT GAGTTTTTGC CCGGTTGTTC GGGTTCTTGT GTGCTGGAGC AGAGTGAGGC ACATATGGTG GCATCGGTGG ATGTTTCAAA AGCGGGGATC AGTAAGACGT TTACCACCTC GAATCAATTG ACGCCCGGGG TGTCGATTGC CATGAGCTTG GTGGATGGGC CTTTTAAAAC GCTGCGCGGT GGATGGTTTT TCACTCCGTT GGATGAAGCC GCGTGTAAAG TTGAGCTGCG TTTGGAGTTT GAGTTTTCCA GCAAAATGAT TGAGTTGGCG TTTGGCAAAA TTTTTAATGA ATTGACCAGC AATATGGTGA ATGCGTTTAC TCGCCGAGCA AAACAGGTGT ATGGAGAGTG A
|
Protein sequence | MKMKQVSRSA LVSFSAEQMF HLVNDVARYP EFLPGCSGSC VLEQSEAHMV ASVDVSKAGI SKTFTTSNQL TPGVSIAMSL VDGPFKTLRG GWFFTPLDEA ACKVELRLEF EFSSKMIELA FGKIFNELTS NMVNAFTRRA KQVYGE
|
| |