| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0364 |
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| Symbol | tcpJ |
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| ID | 5137130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 391466 |
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| End bp | 392227 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640531822 |
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| Product | leader peptidase TcpJ |
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| Protein accession | YP_001216320 |
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| Protein GI | 147673195 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.692702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATACG TTTACTTGAT CCTATTTTCG ATTGTATCAC TGATTTTGGG TAGTTTTAGT
AATGTTGTGA TTTATCGTCT ACCAAGAAAA ATTTTACTAA AGAATCATTT TTTTTATGAC
ATCGATTCAA ATCGTTCCAT GTGCCCTAAA TGTGGAAATA AAATCAGTTG GTATGATAAT
GTTCCATTGT TAAGTTATTT GTTACTTCAT GGTAAGTGTA GACATTGTGA TGAAAAAATT
TCATTAAGTT ATTTTATTGT CGAGTTATCA TTTTTTATAA TCGCATTTCC AATATATTGG
TTATCAACTG ACTGGGTTGA TTCGTTCGTA TTGCTCGGGC TTTACTTTAT TTTATTCAAT
CTTTTTGTAA TTGATTTTAA ATCTATGCTA TTGCCAAATT TACTTACGTA TCCGATATTC
ATGTTGGCAT TTATTTATGT GCAGCAAAAT CCAGCATTAA CAGTTGAAAG CTCTATTATT
GGTGGTTTTG CGGCTTTCAT CATATCCTAT GTGAGTAATT TCATTGTTCG GTTATTCAAA
AGAATCGATG TGATGGGAGG TGGAGATATA AAGCTCTATA CTGCGATTGG TACTCTTATC
GGTGTTGAGT TTGTACCATA TTTATTCTTG CTGTCCTCGA TTATTGCATT TATTCATTGG
TTTTTTGCTA GAGTCTCATG TCGGTATTGC TTATATATCC CTCTTGGACC AAGCATTATT
ATCTCTTTTG TAATTGTTTT TTTTTCAATC CGTTTAATGT GA
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| Protein sequence | MEYVYLILFS IVSLILGSFS NVVIYRLPRK ILLKNHFFYD IDSNRSMCPK CGNKISWYDN
VPLLSYLLLH GKCRHCDEKI SLSYFIVELS FFIIAFPIYW LSTDWVDSFV LLGLYFILFN
LFVIDFKSML LPNLLTYPIF MLAFIYVQQN PALTVESSII GGFAAFIISY VSNFIVRLFK
RIDVMGGGDI KLYTAIGTLI GVEFVPYLFL LSSIIAFIHW FFARVSCRYC LYIPLGPSII
ISFVIVFFSI RLM
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