Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0344 |
Symbol | aldA-1 |
ID | 5136121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 365996 |
End bp | 367621 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640531802 |
Product | aldehyde dehydrogenase |
Protein accession | YP_001216300 |
Protein GI | 147675066 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAATTTC AATACGATTT TGTTTTTTTA AATCAATTCT CATGTAAGAA GTTAATTTCA TTCTATAGAA TAATTTTTCC ATCAAAAAAG GTAGCTGTTT TTTATATGAT TTATCCAATT CCTAATAGCG AAACTTCGAC TGTTCATTTC AAAGATGTAT ATGATAATTA CATTGGAGGT CAATGGATGA AGCCACACAG TGGCGAATAT TTTAGCAATA CGTCACCAGT AAATGGACTG GTGTTTTGTC GTGTTGCTCG CTCGTCTTCG CAAGATGTCG AACTTGCTCT AGATGCCGCC CATAATGCAC TTGAATCATG GTCTACAACA AGTGCAGTAG AAAGATCAAA TATTCTTCTG AGGATTGCTG ATCGAATCGA ATCAAATTTA GAAACTCTCG CAATAGTTGA ATCATGGGAT AATGGAAAAC CTATCCGTGA AACTTTAGCA GCTGACCTAC CGTTGACTAT TGATCACTTT CGATATTTTG CGGCTTGTAT TCGATCACAA GAAGGTGCTG CTTCCGAACT TGACTCTAGA ACGTTAACTT ATCATTTACC GGAACCAATA GGTGTTGTAG GCCAAATAAT ACCATGGAAT TTTCCGTTAC TCATGGCTGC TTGGAAATTA GCTCCCGCTC TTGCAGCAGG TTGTACTGTT GTTCTCAAAC CTGCAGAACA AACCCCCGTT TCAATTTTGT TTTTAATGGA AATTATTGGT GATTTAATTC CAGCTGGTGT TATTAATGTT GTTAATGGTT TCGGCTCTGA AGCAGGTAAT GCATTAGCAA CAAGCCAACG TATCGATAAA CTAGCATTTA CAGGTTCTAC TGAAATTGGT AACCATATTC TTAAATGTGC GGCGGATAAC TTGATTCCAT CCACAATCGA ATTAGGTGGA AAATCTCCAA ACATTTATTT CCCCGATATC TTTTCTCATG AAGACCAATA TCTTGATAAA TGTATTGAGG GTGCACTTTT AGCATTTTTC AACCAAGGTG AGGTTTGTAC CTGTCCATCT AGAATTTTAG TTCATGAATC TATTTATGAA AAATTCATTG CCAAAATTAT TGAACGAGTA GCATTAATTA AACAAGGAAA TCCTTTAGAT ACCGAAACAC AAATTGGTGC TCAAGTATCT AAAGAACAGT ACGATAAGAT TCTTGGTTAT ATACAAATAG GTAAAGATGA AGGGGCAGAG CTAATTTTTG GTGGGCATCC TAACAATCAA GAAAATTATT TATCTGGTGG TTATTATATT AAACCAACCC TATTCTTTGG TCATAATCAG ATGCATATCT TTCAAGAGGA AATATTTGGA CCTGTAATTG CAATCACTAA GTTTAAAGAT GAAATTGAAG CACTGCACCT TGCTAATGAT ACTGTTTATG GTTTAGGTGC CGGTGTGTGG ACACGTGATA TAAATATTGC TCATCGTATG GCAAAAAACA TTAAAGCTGG AAGAGTATGG GTAAATTGTT ATCATGCATA TCCTGCTCAT GCGGCTTTTG GTGGATATAA AAAATCTGGC ATTGGACGAG AAACACACAA ATTAACATTG AGTCATTACC AAAATATAAA AAACGTTCTT ATTAGTCATG AGATTCATCC TCTAGGTCTA TTTTAA
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Protein sequence | MKFQYDFVFL NQFSCKKLIS FYRIIFPSKK VAVFYMIYPI PNSETSTVHF KDVYDNYIGG QWMKPHSGEY FSNTSPVNGL VFCRVARSSS QDVELALDAA HNALESWSTT SAVERSNILL RIADRIESNL ETLAIVESWD NGKPIRETLA ADLPLTIDHF RYFAACIRSQ EGAASELDSR TLTYHLPEPI GVVGQIIPWN FPLLMAAWKL APALAAGCTV VLKPAEQTPV SILFLMEIIG DLIPAGVINV VNGFGSEAGN ALATSQRIDK LAFTGSTEIG NHILKCAADN LIPSTIELGG KSPNIYFPDI FSHEDQYLDK CIEGALLAFF NQGEVCTCPS RILVHESIYE KFIAKIIERV ALIKQGNPLD TETQIGAQVS KEQYDKILGY IQIGKDEGAE LIFGGHPNNQ ENYLSGGYYI KPTLFFGHNQ MHIFQEEIFG PVIAITKFKD EIEALHLAND TVYGLGAGVW TRDINIAHRM AKNIKAGRVW VNCYHAYPAH AAFGGYKKSG IGRETHKLTL SHYQNIKNVL ISHEIHPLGL F
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