Gene VC0395_A0327 details

Gene Information

• Locus tag: VC0395_A0327
• Symbol: citX
• ID: 5135132
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 347715
• End bp: 348251
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 640531785
• Product: apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
• Protein accession: YP_001216283
• Protein GI: 147674374
• COG category: [H] Coenzyme transport and metabolism; [I] Lipid transport and metabolism
• COG ID: [COG3697] Phosphoribosyl-dephospho-CoA transferase (holo-ACP synthetase)
• TIGRFAM ID: [TIGR03124] holo-ACP synthase CitX

Plasmid Coverage information

• Num covering plasmid clones: 43
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCACC ATCCGGATCT TTCAGTCAGT CTGGACCAGC TCCTTCTGCG TAAAGAAGTG 
CGGGTTCGGC AACAAGGTGA GTGGCTAAAG CGCCATTCAC TGCCTCTGGT TTCTTTCACG 
GTTAACATGC CGGGCGCGTT TAAGCTCAAC GCTGCCAGCC AAACCGTGAT GGATGCAGGT 
ATGCGTGCCA TTCAAGAGCT CTGTCAGAAA ACGGGCTGGC GGCAAGTGGC TTGTCAGTTG 
TTGGTGGAAA AAACCGGACC GGAAGCCTTT GTGGTAATTC AGGCTCCATC GGCCAGCATG 
TTGAAAAAAG CCATGATGAA GATTGAACGC GAGCACCCGC TGGGGCGACT GATGGATCTG 
GATGTAATTG ATGTCGATGG ACATATTATT TCGCGCCAAG GTGCGCAGTT GCCAAGACGG 
CGCTGCCTGC TGTGTGAACG CGATGCGGTG ATCTGTGCTC GCTCACGGCG GCACAGTGTC 
GAAGCTTTGC TGGCAAAAAT TGAGGAGATG ACGCATGACT ATTCCTGCTG CGCTTGA 

 

Protein sequence

MSHHPDLSVS LDQLLLRKEV RVRQQGEWLK RHSLPLVSFT VNMPGAFKLN AASQTVMDAG 
MRAIQELCQK TGWRQVACQL LVEKTGPEAF VVIQAPSASM LKKAMMKIER EHPLGRLMDL 
DVIDVDGHII SRQGAQLPRR RCLLCERDAV ICARSRRHSV EALLAKIEEM THDYSCCA