| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0326 |
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| Symbol | citF |
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| ID | 5136988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 346114 |
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| End bp | 347718 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640531784 |
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| Product | citrate lyase, alpha subunit |
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| Protein accession | YP_001216282 |
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| Protein GI | 147674991 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3051] Citrate lyase, alpha subunit |
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| TIGRFAM ID | [TIGR01584] citrate lyase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCCCAT CATCGAACGC GCACGTTGGA CACTGCAACG TGCTGAATCC GGCACCAAAC
ACTAAAGGTC ATCTCATGAG TATCAATACA TTAAATAACC CTCTGTCTGT GCTGGAAGTG
GAACGCTATG CGTTGACGCC TTACACCCAA GCGCACGCGA TCACGCCGCA TCTGCTGGAT
GAGCCTGCCA AGAAAAACCG TAAGGTGAAA AGTTCGATCC GCGAAGCGAT TGTCGATCTT
GGCTTAAAAG ATGGCATGAC CATCTCTTTC CACCATGCAT TTCGTGGCGG CGATAAAACC
GTCAATCTGG TGATGGAGGA GATTGCTGAA TTGGGGATTA AAAACCTCAC GCTCGCCTCA
AGCTCGCTCA CCTCTTGTCA TTCGCCTTTG ATTGAACACA TCAAAAACGG CGTGGTGAGC
AAGATTTACA CCTCAGGGAT CCGCGGAGCG CTGGCCGACA GCATTTCTAA CGGCCTGCTT
GATGAGCCAG TGCATATTCA TTCGCACGGT GGTCGTGTAC ATCTAATCCA AAGTGGTGAG
CTGTACATCG ACATGGCGTT TATTGGCGTG CCTTGTTGCG ATGAGTTTGG TAACGCCAAC
GGTTTTAAAG GTAAATCCAA TTGTGGCTCA CTCGGCTATG CCAAAGTTGA TGCCGAGCAT
GCTGAAAAAG TGGTGATGCT GACCGAAGCG ATCGTCGGTT TCCCGAATTT CCCTGCATCG
ATTACTCAAG ATCGTGTTGA TGCGGTGGTA CAAGTAGCCG AAGTGGGCGA CCCAAGCAAA
ATCGGTGGGG ATGCCACGCG CATGACCACC AACCCACGCG AGCTGTTGAT TGCCAAACGC
GCTGCGGAAG TCATTGAGCA TTCTGGCTAT TTCTATGATG GTTTTTCAAT GCAGACTGGT
TCGGGCGGTG CATCGCTCGC GGTTGCGCGC TTTTTGAAAG AGAAGATGCT GCGCCAAGAC
ATCCGTGCTT CTTTCGCTCT CGGTGGTATC ACCGCAACCA TGGTCGATAT GCATGAGCAG
GGGCTGATTG ATTACTTGCT CGATGTGCAG TGTTTCGATT CGGTGGCGGC GGGCTCGTTA
GCGCGCAATC CGCATCATCT CGAAATCTCT GCTAACGAAT ACGCCAACCC AAGCTCGAAA
GGGGCGGCGG TGGATAGGCT GGATGTGGTT ATCTTGAGTG CGCTGGAGAT TGATACCCAG
TTTAACGTTA ACGTGATCAC CGGCTCTGAT GGGGTAATTC GCGGTGCATC CGGCGGCCAC
TGCGACACGG CGGCTGCGGC AAACTTATCG ATTATTGTGG CGCCTTTGGT GCGTGGCCGC
ATTCCGACCT TGGTCGAGAA GGTCACTAAC GTCATCACCC CAGGATCCAC CATTGATGTG
TTGGTGACGG ATCAAGGTAT CGCGGTAAAC CCGAATCGTC CCGAACTGAA AGCACGTTTC
ATCGAGGCGC AACTGCCCGT TGTCGAGATT GAAGCGTTGC AACAGCGTGC CGAGTTGCTG
ACGGGCAAAC CCCAGCCGTT GCAATTTGAA GACAAAACCG TTGCCTTTGT TCACTACCGT
GACGGTTCGA TCATTGATGT TATCAAACAG GTAAAAAGCC TATGA
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| Protein sequence | MGPSSNAHVG HCNVLNPAPN TKGHLMSINT LNNPLSVLEV ERYALTPYTQ AHAITPHLLD
EPAKKNRKVK SSIREAIVDL GLKDGMTISF HHAFRGGDKT VNLVMEEIAE LGIKNLTLAS
SSLTSCHSPL IEHIKNGVVS KIYTSGIRGA LADSISNGLL DEPVHIHSHG GRVHLIQSGE
LYIDMAFIGV PCCDEFGNAN GFKGKSNCGS LGYAKVDAEH AEKVVMLTEA IVGFPNFPAS
ITQDRVDAVV QVAEVGDPSK IGGDATRMTT NPRELLIAKR AAEVIEHSGY FYDGFSMQTG
SGGASLAVAR FLKEKMLRQD IRASFALGGI TATMVDMHEQ GLIDYLLDVQ CFDSVAAGSL
ARNPHHLEIS ANEYANPSSK GAAVDRLDVV ILSALEIDTQ FNVNVITGSD GVIRGASGGH
CDTAAAANLS IIVAPLVRGR IPTLVEKVTN VITPGSTIDV LVTDQGIAVN PNRPELKARF
IEAQLPVVEI EALQQRAELL TGKPQPLQFE DKTVAFVHYR DGSIIDVIKQ VKSL
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