| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0322 |
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| Symbol | citS |
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| ID | 5135121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 342280 |
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| End bp | 343626 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640531780 |
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| Product | citrate/sodium symporter |
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| Protein accession | YP_001216278 |
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| Protein GI | 147675222 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3493] Na+/citrate symporter |
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| TIGRFAM ID | [TIGR00783] citrate carrier protein, CCS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAGA AAACCCTACA TTTAGATAAA AAGTCCGCAG TCGTAGGTGG ATTGAATCTA
AGCCAAACGA AAATATTTGG TACTCCACTC CCTTTATTTT TATTTTTACT GCTCACCGTA
TTAGCCGCTC ATTTTACTGA CACTTTACCT AGCGGTCTGG TGGGTGGTTT TGCGTTTATG
TTTGTCATAG GCGCAATATT TGGCGAAGTT GGCAAACGTC TACCGATTTT TAATAAATAC
ATCGGCGGTG CGCCAGTAAT GATTTTCTTG GTGGCCGCTT GGTTCGTGCA CATGGGCTGG
CTCAGTGATC GCGAAATCAA AACCGTGACC GAAGTGATGG ATAAGAGCAA ATTCTTGGAT
CTGTTCATCG CAGTGCTGAT CACTGGCTCA ATTCTGGCGG TCAACCGTAA ACTGCTGATC
CGCTCTCTGG CCGGCTACAT TCCAACCATT CTCGCTGCGG TAGCGGGTGC TGCGGTATTC
GGTATCGCTA TCGGCCTCGT ATTTGGTATC ACGCCTGATC GCATCATGAT GCTGTACGTG
CTACCGATTA TGGGCGGTGG TAATGGCGCT GGCGCTATCC CGCTTTCCGA AATTTATGAA
TCGGTCACAG GTGGATCGAA AGAGCAATAC TACTCGGTTG CTATCGCGAT CCTGACTATC
GCCAACATTG TGGCCATCGT CGCCGCGGCA GTCATCAACA TCATTGGTGA AAAGATCCCA
TCCTTAACCG GCAATGGCGA ACTGGTACGC AGCTCGAAAC TGGATGTGAG CGAAGAAGCG
AAAAACCTAA CGGTGACCCA CCGTGAAATC GCCATCGGTT TAATGCTGGC CGCTTGCGTC
TACACCTTCT CTTATGCGCT ATCGAAAGAG ATTTTGCCCG GTTTTGGTTC GATTCAAATC
CACACCTTTG CTTACATGGT GGTGATCATC GCCATCCTTA ACGCGGCGGG GTTGTGCAGT
GATGAAATCA AAGAAGGCGC GAAACGTCTA TCGAATTTCT TCTCAAAACA GATGCTGTGG
CTATTGATGG TCGGCGTTGG TATTGCTTAT ACCGATCTGG CTGAAATCAT CAACGCTCTT
ACCTTTGCCA ACGTGATCAT TGCTACTGTG ATTGTGCTTG GTGCAATTAT CGGTGCTGCT
TTAGGTGGCT GGGCGATGGG CTTCTACCCT GTTGAAGCTT CGATTACAGC AGGGCTATGT
ATGGCAAACC GCGGCGGCTC GGGCGACCTT GAAGTGCTTG CCGCCTCTAA CCGTATGAGC
TTGCTCTCTT ACGCACAAAT CTCTTCACGT CTGGGTGGCG GCATTGTGCT GGTCATCGCC
AGCGTCGTAT TCGGAATGTT TGTTTAA
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| Protein sequence | MNEKTLHLDK KSAVVGGLNL SQTKIFGTPL PLFLFLLLTV LAAHFTDTLP SGLVGGFAFM
FVIGAIFGEV GKRLPIFNKY IGGAPVMIFL VAAWFVHMGW LSDREIKTVT EVMDKSKFLD
LFIAVLITGS ILAVNRKLLI RSLAGYIPTI LAAVAGAAVF GIAIGLVFGI TPDRIMMLYV
LPIMGGGNGA GAIPLSEIYE SVTGGSKEQY YSVAIAILTI ANIVAIVAAA VINIIGEKIP
SLTGNGELVR SSKLDVSEEA KNLTVTHREI AIGLMLAACV YTFSYALSKE ILPGFGSIQI
HTFAYMVVII AILNAAGLCS DEIKEGAKRL SNFFSKQMLW LLMVGVGIAY TDLAEIINAL
TFANVIIATV IVLGAIIGAA LGGWAMGFYP VEASITAGLC MANRGGSGDL EVLAASNRMS
LLSYAQISSR LGGGIVLVIA SVVFGMFV
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