Gene VC0395_A0320 details

Gene Information

• Locus tag: VC0395_A0320
• Symbol: oadA-2
• ID: 5136030
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: -
• Start bp: 340095
• End bp: 341912
• Gene Length: 1818 bp
• Protein Length: 605 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640531778
• Product: oxaloacetate decarboxylase
• Protein accession: YP_001216276
• Protein GI: 147674719
• COG category: [C] Energy production and conversion; [I] Lipid transport and metabolism
• COG ID: [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit; [COG5016] Pyruvate/oxaloacetate carboxyltransferase
• TIGRFAM ID: [TIGR01108] oxaloacetate decarboxylase alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 47
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGGAGA AACCACAGAT GACTCAGGCG ATCAAACGCG TTGGTGTTAC GGATGTCGTA 
TTGCGCGATG CTCACCAATC TCTTTTTGCC ACCCGTTTAC GAATTGACGA CATGCTGCCG 
ATTGCGCAGC AATTAGATCA GATCGGTTAT TGGTCTTTGG AATGTTGGGG AGGCGCGACC 
TTTGACAGCT GCATCCGCTT TTTAGGCGAA GACCCATGGC AACGTCTACG TTTACTCAAA 
CAAGCCATGC CCAATACGCC ACTGCAAATG CTGCTGCGCG GGCAAAACCT GCTCGGCTAC 
CGTCACTATG CCGATGATGT GGTGGATACT TTTGTAGAGC GTGCGGTGAA AAACGGCATG 
GATGTATTTC GTGTCTTCGA TGCGATGAAC GATGTACGCA ACATGCAACA GGCGCTGCAA 
GCGGTGAAAA AGATGGGCGC GCATGCGCAA GGCACGCTCT GCTACACCAC CAGCCCAGTA 
CACAATTTAC AAACTTGGGT CGATGTGGCG CAGCAACTGG CGGAGCTCGG CGTCGACTCA 
ATAGCCCTGA AAGATATGGC CGGCATTTTG ACCCCGTATG CCGCTGAAGA GCTAGTGTCT 
ACCCTGAAAA AACAAGTGGA TGTCGAGCTG CATCTGCACT GCCACTCCAC CGCGGGCCTT 
GCCGATATGA CTCTGCTTAA AGCGATTGAA GCGGGCGTGG ATCGGGTTGA TACCGCGATT 
TCCAGCATGA GTGGCACTTA TGGTCATCCT GCGACCGAAT CACTGGTCGC TACCTTGCAA 
GGCACCGGCT ACGACACCGG ATTGGATATC GCCAAACTCG AACAGATTGC GGCTTACTTC 
CGTGATGTAC GCAAAAAATA CCACGCCTTT GAAGGCATGA TGAAAGGCAG CGATGCGCGC 
ATTTTGGTGG CTCAGGTTCC TGGCGGCATG CTGACCAACA TGGAAAGCCA ACTCAAACAA 
CAAAACGCGC TGGATAAACT CGATTTAGTG CTCGAAGAGA TCCCACGCGT GCGTGAAGAA 
CTCGGCTTTT TGCCTCTGGT CACCCCTACC TCACAAATTG TCGGTACACA AGCGGTGATC 
AACGTGGTGC TGGGTGAGCG TTACAAAACC ATCACCAAGG AAACCAGCGG TGTGCTGAAA 
GGGGAATACG GCAAAACGCC AGCACCGGTT AACACTGAGC TGCAAGCTCG CGTGTTGGCG 
GGCGCAGAAG CCATTACTTG TCGCCCTGCG GATTTGATTG CCGCCGAAAT GCCAACCTTG 
CAAGACCGCG TATTGCAGCA AGCTAAAGAG CAGCACATCA CCCTCGCCGA GAATGCGATT 
GATGATGTAC TGACCATTGC GCTGTTTGAT CAGGTAGGCT GGAAGTTTTT AGCCAACCGC 
CATAACCCAG AAGCCTTTGA ACCTGCGCCG CAAGCGATAA GTTCAGCCTG CACACCGAAA 
GCGCCAACAG AAAAAAGCAA AGTACAGCCA GTGGAAAGTC ACGGTGTGTA CACCATTACC 
GTCAACAACC AAAGCTATGT GGTGAAGGTG GATGAAGGCG GTGACCTGAC GCATGTTGCG 
CCGACGGCAT CAACCAACCA CGCACCAGTC CCGAGTGCCG CAGAAGGTGA AAACCTCGCC 
GCGCCCCTTT CTGGCAACAT CTGGAAAATT CATGCCTCAG CCGGTGATGA AGTGGCCGAA 
GGCGATGTCT TGCTGATTTT AGAAGCCATG AAGATGGAAA CCGAAATCCG CGCGCCACGT 
GCCGGAGTGA TCAGTGCGAT TGAAGTCAAT GAAGGCGATG CCGTACAAGT CGGCGATGCT 
TTGTTGGTAT TGGCGTAA 

 

Protein sequence

MKEKPQMTQA IKRVGVTDVV LRDAHQSLFA TRLRIDDMLP IAQQLDQIGY WSLECWGGAT 
FDSCIRFLGE DPWQRLRLLK QAMPNTPLQM LLRGQNLLGY RHYADDVVDT FVERAVKNGM 
DVFRVFDAMN DVRNMQQALQ AVKKMGAHAQ GTLCYTTSPV HNLQTWVDVA QQLAELGVDS 
IALKDMAGIL TPYAAEELVS TLKKQVDVEL HLHCHSTAGL ADMTLLKAIE AGVDRVDTAI 
SSMSGTYGHP ATESLVATLQ GTGYDTGLDI AKLEQIAAYF RDVRKKYHAF EGMMKGSDAR 
ILVAQVPGGM LTNMESQLKQ QNALDKLDLV LEEIPRVREE LGFLPLVTPT SQIVGTQAVI 
NVVLGERYKT ITKETSGVLK GEYGKTPAPV NTELQARVLA GAEAITCRPA DLIAAEMPTL 
QDRVLQQAKE QHITLAENAI DDVLTIALFD QVGWKFLANR HNPEAFEPAP QAISSACTPK 
APTEKSKVQP VESHGVYTIT VNNQSYVVKV DEGGDLTHVA PTASTNHAPV PSAAEGENLA 
APLSGNIWKI HASAGDEVAE GDVLLILEAM KMETEIRAPR AGVISAIEVN EGDAVQVGDA 
LLVLA