| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0310 |
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| Symbol | |
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| ID | 5135574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 327946 |
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| End bp | 328872 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640531768 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001216266 |
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| Protein GI | 147674202 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 67 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTATGC TGCGTGATTA TGATCTAAAC CTGCTGACGG TATTTGATTC TGTCATGAAA
TTAGGCTCAG TCAGTAAAGC AGCGGATAAG CTAGGTATGA CTTCCGCAGC GGTGAGTCAA
AATTTATCAC GCTTACGAGA ACAAGTTGGC GATCCGTTGT TTATCCGTCA GGGACGTGGG
TTACAGCCGA CGCAGTATGC GCTCAATATG CACAAACATG TGGCGGAAGG CTTGAGTGCC
ATTCGTTTTG GTTTAGAAAC CGATGCCGGT TTTGATCCTG CAACCAGTAA GCGTGAGTTT
ATTATTGGCG GTCAGGGCTA TTTCGATTTG GTGGTATTAC CGCCACTTTT GCAAAAAATC
AGCGACATCG CCCCGCATAT CACGGTGAAT TTAAAGTCTT ATGAGGACGA TCATTTCACA
CCAAGCCAAG TATTAAGTGA GCGAGAGGCG GATCTGTTTT TGGCTGCATT ACCCATCAGC
CATCCCTCTA TCGTCACCAC ACAGGTGGCG GAGGAGGCCT TGGTTGTGGT GTATGCCAAA
AATCATCCGC GTCTTGGAAG TACCCTCAGT TTTGAGCAGT TTTTTGCAGA AAAACACACT
GCATTAACCA GTCGTCGCTT TGGTAATTAT CTCTTTTCTA GCCTAGTCGA TCAGGTGCTG
CCCGCACGTC GAGTGCATTA TCAAAGTGAG TCGATGCTCA ATTTGATGGC GACCGCATCC
GTCACCGATC TGCTCTGTTT TACTCCAAAG CGTTTAGCGG ATATGTGGGC GGAGAAATTG
GGTTTACAGA TCCAACCTTT GCCGTTTGAA ATCCGCTCGG TTCCGACTTT TATGTGCTGG
CATAAAGCCA AACAGCAAGA TAAAGGGCTG ATTTGGCTGC GCGAGCAAAT TGAGGCGATT
CTCTGCGCCA ATCCTCAATC TATTTAA
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| Protein sequence | MIMLRDYDLN LLTVFDSVMK LGSVSKAADK LGMTSAAVSQ NLSRLREQVG DPLFIRQGRG
LQPTQYALNM HKHVAEGLSA IRFGLETDAG FDPATSKREF IIGGQGYFDL VVLPPLLQKI
SDIAPHITVN LKSYEDDHFT PSQVLSEREA DLFLAALPIS HPSIVTTQVA EEALVVVYAK
NHPRLGSTLS FEQFFAEKHT ALTSRRFGNY LFSSLVDQVL PARRVHYQSE SMLNLMATAS
VTDLLCFTPK RLADMWAEKL GLQIQPLPFE IRSVPTFMCW HKAKQQDKGL IWLREQIEAI
LCANPQSI
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