| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0306 |
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| Symbol | viuD |
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| ID | 5136071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 324157 |
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| End bp | 325209 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640531764 |
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| Product | vibriobactin and enterobactin ABC transporter, permease protein |
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| Protein accession | YP_001216262 |
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| Protein GI | 147673882 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAGC TGATGGGAAT AAGAGTTGCG TCCTCAAAGC GAGAAAATCC GACGTTGGCA
GGGCGTGATT ACTGGCTAAT GGGGTTGATG CTGGTGGCAT TGATGGGATT GACGATAAGC
AGTGTGTTTG TCGGATCTCG CGACATTCCT TATGCCGTGA CTTTCGATGC GCTGTTTCAT
TTTGATGAGC AGAATACTCA GCATCTTCTA GTGCATTACC TACGTGTGCC GCGCACGGGG
TTAGCGATAT TGGTGGGCGC AGCGCTCGGG GCTGCAGGCG TTATCATGCA AGCGATGACG
CGTAACCCAT TGGCGGATCC GGGCATTTTG GGTGTCAATG CGGGCGCAAT CTTGATGGTG
GTGATTGGCA TTGCTGGGTT TGGTCTAACC GATATGCTGC ACTATTTGTG GTTTGGCTTA
TTTGGCGCGG CAGCAACCAG TGTGGGCGTT TATCTGCTGG CAGGTATCAA TCAATCACCC
AATCCCGTTC GAGTGGTGCT GGCTGGTGCG GCGATGACGG TGGTGCTCTT GTCTATGACT
CATTTGATTA TGCTCAATAG CGCCCAAGAG GTGTTTAACC AGTTTCGACA TTGGTCGATT
GGCTCTTTGC AAGGCAGAGG ATATGAAGTT TTGCTGCCGA CAAGTGTATT CGTACTACTC
GGGTTGATCG CGGCTATCTT ACTCGCCCGC GGATTGGATA CTGTGGTGCT CGGGCATGAC
GCGGGCAAAG CATTAGGCGT CAATCCGTTA TGGATCTGGA TAGCTTCTGC CGCCGTGGTC
ACGCTGTTGG CTGGCACCGC AACCGCAGCG GCAGGGCCAA TCAGTTTTCT TGGCTTAACC
GCGCCTCATT TAGCGCGGCT TTGGGTGGGC GCTGAACATC GTCGTTTACT GCCTTACTCT
ATGTTGCTTG GGGCGCTGTT ATTGTTAGGT GCCGATCTGG CCGGGCGGCT AATCGGTTCA
AACGATGAAA TCAGCGCAGG GATCATGGTC GCCTTAATCG GAGGGCCAGT CTTTGTGCTA
TTGGTGAGAC GATGGAAACT ATCACATCTG TAG
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| Protein sequence | MNELMGIRVA SSKRENPTLA GRDYWLMGLM LVALMGLTIS SVFVGSRDIP YAVTFDALFH
FDEQNTQHLL VHYLRVPRTG LAILVGAALG AAGVIMQAMT RNPLADPGIL GVNAGAILMV
VIGIAGFGLT DMLHYLWFGL FGAAATSVGV YLLAGINQSP NPVRVVLAGA AMTVVLLSMT
HLIMLNSAQE VFNQFRHWSI GSLQGRGYEV LLPTSVFVLL GLIAAILLAR GLDTVVLGHD
AGKALGVNPL WIWIASAAVV TLLAGTATAA AGPISFLGLT APHLARLWVG AEHRRLLPYS
MLLGALLLLG ADLAGRLIGS NDEISAGIMV ALIGGPVFVL LVRRWKLSHL
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