| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0302 |
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| Symbol | vibC |
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| ID | 5137294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 319534 |
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| End bp | 320721 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640531760 |
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| Product | vibriobactin-specific isochorismate synthase |
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| Protein accession | YP_001216258 |
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| Protein GI | 147675125 |
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| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1169] Isochorismate synthase |
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| TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTCATGA AGCGTGAAGT GGTCGGATAC ACCACTATGT CTGAACATCT GATCGACACC
CAACTCACTC GCTCACCGTT TTTCTTTGCC TCAGCAAACC AGTCAATGCT CGGTTGTGGG
GTCGCTCATG CTTTTCAGCA AGCCATTCCT TTTGCTGAAC TGGCTAACCA AGCCAAACAG
CTTTTGCAGC AGGCCAAACG TGATGAGTGC GACAATCCAT TACTGTTTGG CATAGTGCCG
TTTGACCCTA AAACACCGAC TCGATTTATG ATTCCGCGCA CCTTATACGT GTCGAGTAGC
CCGCGCTTAA ACCGTCCAGC TCACCTCACC CGCCAAGTGG CTAAACTCAT CTCCTCGCCA
TCAGGAGAGC AATACAAGCA AGGTGTAAGC CATCTGCTCA ACATGTTTCA TCACTCTGGG
CTGTCTAAAG TGGTGCTGTC GCGCGCCATT GAAATTGCCA CCGAGCAAGA GATAGCACTA
CCGACCTTGC TGCGTAGTCT GCTCGCCATT AATCATCACG GCTATACTTT TGCGGCCAGC
TTGGACGAGC AGAGAAAGCT GATTGGTGCA AGCCCTGAAC TCTTGGTCGC CAAACGCGGA
AACTATCTCA TCTCAAACCC ACTGGCTGGC TCGCGCCCGA GAAGTCAAGA TGCCCAAGAA
AATGCGCAGC GCCGTGCCTC ACTGCTCAAT ACCGCCAAAG ATTTGCATGA GCACGGTTTA
GTCGTCGAAG AAGTCGAGCG GATCATGAGC CGCTACTGTC GTAACTTGTA CACCCCCATG
GTGCCTTCTG TGATTGAAAC CGAAACCATG CTGCACCTCT CAACCCTACT TGAAGGACAA
GTCAGCGATC CTGAGGTTTG TGCTTTGCAA GTCGCCGCCG ATTTACACCC CACTCCAGCC
GTATGCGGTT TTCCGCGCGA ATCGGCTTAT CAAGCAATAA GAGAGCTGGA AGAATTTGAT
CGTGGCTACT TCACTGGCAT GGTCGGTTGG TGTGATGCAC GTGGCAATGG TGAGTGGGTA
GTCACCATTC GCTGTGCTGA AGTGGGATCT CACCAAATGA AGCTTTTTGC TGGCGCAGGG
ATTGTCGATG AGTCGTTACC ACAAAGTGAA CTGGAAGAGA CGGGCGCGAA GATGAAAACC
ATCTTGGCTG CGGCAGGTAT TGAGCTCAAC GATGTGCTCA CCGCTTAA
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| Protein sequence | MVMKREVVGY TTMSEHLIDT QLTRSPFFFA SANQSMLGCG VAHAFQQAIP FAELANQAKQ
LLQQAKRDEC DNPLLFGIVP FDPKTPTRFM IPRTLYVSSS PRLNRPAHLT RQVAKLISSP
SGEQYKQGVS HLLNMFHHSG LSKVVLSRAI EIATEQEIAL PTLLRSLLAI NHHGYTFAAS
LDEQRKLIGA SPELLVAKRG NYLISNPLAG SRPRSQDAQE NAQRRASLLN TAKDLHEHGL
VVEEVERIMS RYCRNLYTPM VPSVIETETM LHLSTLLEGQ VSDPEVCALQ VAADLHPTPA
VCGFPRESAY QAIRELEEFD RGYFTGMVGW CDARGNGEWV VTIRCAEVGS HQMKLFAGAG
IVDESLPQSE LEETGAKMKT ILAAAGIELN DVLTA
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