| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0298 |
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| Symbol | |
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| ID | 5136807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 314090 |
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| End bp | 315814 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531756 |
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| Product | putative chitinase |
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| Protein accession | YP_001216254 |
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| Protein GI | 147674479 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3979] Uncharacterized protein contain chitin-binding domain type 3 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGAGAGG GACTTTTATC CATGTTTAAA CTCAAACATA CCGCATGGTG GGTGGCCATG
GCGTGTGCAT TGCCTGCGCA AGCGGCGATG AATATTCAGC CTGATCCACA AAATCCTGGT
GGATATTTGG TGGCTAAAGC GGATATTGCC GCAGCAGAAC AAGCCAAAAC CGCCAATCCT
ATGTATGCCA TTTGGTCAAA TGCCTTAGCG ACCCGCGCCA ATGCGATTGT TGATGCGATC
GAGCCGGGAC TGGCGACAAA CCCTGATAAC GTGAAACGGG TTGAACGCGT ATTTCCTGAG
TCTGAGTGGA ATTTCCTCAC TCACATGGCG GCACCTGAAT ACACTTATAC CCGTTTCTTG
CGTGCGATTG GCAAATTCCC GGCATTTTGT GCCGAGTATA CCGATGGCCG CAATTCTGAC
GCGATTTGTA AAAAATCGAT CGTGACCGCT TTTGCTCACT TTGCTCAGGA AACTGGTGGA
CACATCGCGA AGGACAACAT TTCTGATAAC CCATTAGCGC TGGAAGAGTG GCAACAAGCG
CTGGTGCATG TGCGTGAAAT GGGCTGGTCT GAAGGTCAAG AAGGTTATAC CACGGGGTGT
GGTCAAAATG ACTGGCAGAA CAAGAAGTGG CCTTGTGCTA CTGGGCAAGG TTACTTTGGC
CGTGGAGCAA AACAGCTTTC TTACCACTTT AACTACGGCG CTTTCTCCGA GGCTATGTTT
GATGGTGATG CAACAGTATT GTTGAACAAC CCCGGTTTAG TGGCTGATTC GTGGTTGAAC
CTTGCGTCTG CAATCTGGTT CTTCCTCACG CCACAAGCAC CAAAACCTGC CATGTTGCAT
GTGATTGATC GTACTTGGGT GCCTTCACAG CGTGAAATTG ATGCAGGGAT TGGTTACGGT
TTCGGCACCA CGATCAATAT CATCAATGGT GGTATTGAGT GCGGGGAGCA AAACAAAGAT
AAAGGGCAGC CGGTTAACCG TATTCGTTAT TGGGAAGGCT TAGCGGCGCA TTATCAAATC
CCTATTGAAG CTGATGAGAA GAATACCTGC TGGCAGCAAC TGCCTTACGG CAGCCTTAAC
CTCAATGGTG CGACCGATGT GCTTTACACA AACTGGGATG GTAACTGGAA ATATTATCCA
GATCGTCCGG GTGGCTACTC ATTTGAATGT GAGTTGGTGG GGTTCCAAAC CGCGTATTCT
GCTTTGGTGG AAGGGGATTA TGAGAAGTGT GTGACTAATC TGTATGGTTC ACATGCGAGC
TGGCCAAAAG TTCGTGTAGT GGAAAAACTT GATCCATTAC CTACCGATCC GACAGATCCA
CCTGTAGGTG GTGCCCCTGC GTGGGAAGTG GGTAAGGTTT ATAACTCAGG TGACAAGGTC
AGTTATAAAG GTGCGGTTTA CCAAGCTAAA TGGTGGACAC AAGGTGATGA ACCTTCTAAA
GGCGGGCCTT GGGCGTTAGT TTCTGGTGAG CCAACACCAC CAACTGAGCC AACGCCAAGC
GAGCCAGTAC CTCCCACTGA ACCTGTACCA CCATCGGAGC CAACACCAGT GCCGCCGACA
GAGCCAGCCC CTACGGATGC CATTGTGTGG CAACCTGGAG TCACTAAGGT CTCGAACGGC
GATAAAGTGA CCTATAACGG CCAATGCTTT ATTACTAAGA ACAGTCCAGG CGTTTGGGAG
TCACCTACTC AATCTAACTG GTTCTGGGAT AAGGTGTCCT GCTAA
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| Protein sequence | MREGLLSMFK LKHTAWWVAM ACALPAQAAM NIQPDPQNPG GYLVAKADIA AAEQAKTANP
MYAIWSNALA TRANAIVDAI EPGLATNPDN VKRVERVFPE SEWNFLTHMA APEYTYTRFL
RAIGKFPAFC AEYTDGRNSD AICKKSIVTA FAHFAQETGG HIAKDNISDN PLALEEWQQA
LVHVREMGWS EGQEGYTTGC GQNDWQNKKW PCATGQGYFG RGAKQLSYHF NYGAFSEAMF
DGDATVLLNN PGLVADSWLN LASAIWFFLT PQAPKPAMLH VIDRTWVPSQ REIDAGIGYG
FGTTINIING GIECGEQNKD KGQPVNRIRY WEGLAAHYQI PIEADEKNTC WQQLPYGSLN
LNGATDVLYT NWDGNWKYYP DRPGGYSFEC ELVGFQTAYS ALVEGDYEKC VTNLYGSHAS
WPKVRVVEKL DPLPTDPTDP PVGGAPAWEV GKVYNSGDKV SYKGAVYQAK WWTQGDEPSK
GGPWALVSGE PTPPTEPTPS EPVPPTEPVP PSEPTPVPPT EPAPTDAIVW QPGVTKVSNG
DKVTYNGQCF ITKNSPGVWE SPTQSNWFWD KVSC
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