| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0296 |
|---|
| Symbol | guaB |
|---|
| ID | 5136351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio cholerae O395 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009457 |
|---|
| Strand | + |
|---|
| Start bp | 310725 |
|---|
| End bp | 312194 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640531754 |
|---|
| Product | inosine 5'-monophosphate dehydrogenase |
|---|
| Protein accession | YP_001216252 |
|---|
| Protein GI | 147673264 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0516] IMP dehydrogenase/GMP reductase |
|---|
| TIGRFAM ID | [TIGR01302] inosine-5'-monophosphate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCACATGC TACGAATCGC AAAAGAAGCT CTAACCTTTG ACGATGTTTT ACTCGTCCCT
GCTCATTCCA CCGTTCTTCC AAACACTGCC GATCTTCGCA CTCGGTTAAC CAAAAATATT
GCGCTGAACA TCCCTATGGT TTCTGCGTCT ATGGATACTG TTACGGAAGC ACGTCTTGCG
ATCGCTCTGG CTCAAGAAGG CGGCATTGGC TTTATTCACA AGAATATGTC GATTGAACAG
CAAGCGGCTC AAGTTCACCA AGTGAAAATC TTTGAAGCGG GTGTGGTGAC TCACCCTGTC
ACTGTCCGTC CAGAACAAAC CATTGCTGAT GTTATGGAAC TTACCCATTA CCACGGTTTT
GCGGGTTTCC CTGTTGTCAC TGAAAACAAT GAACTGGTTG GTATAATCAC TGGCCGTGAC
GTTCGCTTCG TTACTGATCT CACCAAATCT GTGGCTGCTG TGATGACGCC AAAAGAGCGC
CTCGCGACAG TCAAAGAAGG TGCAACGGGT GCAGAAGTGC AAGAAAAAAT GCACAAAGCG
CGTGTTGAAA AAATTCTGGT GGTGAATGAT GAGTTCCAAC TCAAAGGCAT GATCACCGCG
AAAGATTTCC ACAAAGCCGA AAGCAAGCCA AATGCGTGTA AAGATGAGCA AGGCCGTCTG
CGTGTTGGTG CCGCTGTCGG TGCAGCACCG GGTAACGAAG AGCGTGTTAA AGCTCTGGTT
GAAGCCGGGG TTGACGTTCT ACTGATCGAC TCTTCTCATG GCCACTCCGA AGGGGTTTTA
CAGCGTATTC GCGAAACTCG CGCAGCTTAT CCACACCTTG AAATCATTGG TGGTAACGTG
GCGACAGCTG AAGGTGCACG CGCACTTATT GAAGCGGGCG TAAGCGCAGT GAAAGTCGGT
ATCGGTCCTG GCTCAATCTG TACCACGCGC ATTGTCACAG GCGTGGGCGT TCCACAAATT
ACTGCTATTG CTGATGCAGC GGGTGTGGCT AACGAGTACG GTATTCCTGT TATTGCTGAT
GGCGGTATTC GTTTCTCTGG CGACATTTCG AAAGCGATTG CGGCGGGGGC TTCTTGCGTT
ATGGTTGGCT CAATGTTTGC TGGTACTGAA GAAGCCCCAG GTGAAGTGAT CCTTTACCAA
GGCCGCTCTT ACAAAGCCTA CCGTGGAATG GGTTCACTGG GTGCGATGTC AAAAGGTTCA
TCAGATCGTT ACTTCCAAAC CGATAACGCG GCAGACAAGC TGGTTCCAGA AGGCATCGAA
GGCCGTATCG CTTATAAAGG CCATCTGAAA GAGATTATCC ACCAACAAAT GGGCGGCCTA
CGCTCTTGTA TGGGGCTGAC TGGCTCAGCC ACAGTAGAAG ATCTGCGTAC TAAAGCTCAA
TTTGTACGCA TTTCTGGTGC GGGTATGAAA GAGTCTCACG TACATGACGT GCAGATCACT
AAAGAAGCAC CAAACTACCG TCTGGGTTAA
|
|---|
| Protein sequence | MHMLRIAKEA LTFDDVLLVP AHSTVLPNTA DLRTRLTKNI ALNIPMVSAS MDTVTEARLA
IALAQEGGIG FIHKNMSIEQ QAAQVHQVKI FEAGVVTHPV TVRPEQTIAD VMELTHYHGF
AGFPVVTENN ELVGIITGRD VRFVTDLTKS VAAVMTPKER LATVKEGATG AEVQEKMHKA
RVEKILVVND EFQLKGMITA KDFHKAESKP NACKDEQGRL RVGAAVGAAP GNEERVKALV
EAGVDVLLID SSHGHSEGVL QRIRETRAAY PHLEIIGGNV ATAEGARALI EAGVSAVKVG
IGPGSICTTR IVTGVGVPQI TAIADAAGVA NEYGIPVIAD GGIRFSGDIS KAIAAGASCV
MVGSMFAGTE EAPGEVILYQ GRSYKAYRGM GSLGAMSKGS SDRYFQTDNA ADKLVPEGIE
GRIAYKGHLK EIIHQQMGGL RSCMGLTGSA TVEDLRTKAQ FVRISGAGMK ESHVHDVQIT
KEAPNYRLG
|
|---|
| |