| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0289 |
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| Symbol | hisS |
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| ID | 5135784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 302957 |
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| End bp | 304225 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531747 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | YP_001216245 |
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| Protein GI | 147674318 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAAAAA CTATTCAAGC AATCCGAGGC ATGAACGATT GTCTCCCAAC CCAGTCTCCA
CTTTGGCAAA AAGTGGAAGG CGTGGTGAAA AATGTAATCA GCGCTTACGG TTACAGCGAA
GTTCGTATGC CAATCGTTGA GATGACTCAT CTATTTAGCC GCGCCATCGG TGAAGTGACC
GATGTGGTGG AAAAAGAGAT GTACACCTTT GAAGATCGCA ATGGTGATAG CTTAACGCTG
CGACCTGAAG GTACGGCGGG CTGTGTGCGC TCTGGTATCG AAAATGGTTT GCTGTACAAC
CAAGAGCAAC GTTTGTGGTA CATGGGACCG ATGTTCCGTC ACGAACGTCC GCAAAAAGGT
CGTTACCGTC AATTCCATCA GTGTGGTGTT GAAGTGTTTG GTTTAGATGG CCCCGATGTG
GACGCTGAAC TGATCATGAT GACGGCACGT CTGTGGCGCG AATTGGGTAT TGCACAACAT
GTGCGTTTAG AGCTCAACTC GATTGGCTCT CTAGAGGCTC GCGCTAATTA TCGCACCGCC
TTGATTGACT ATCTTGAGCA GTACCAAAAC GTACTGGATG AAGATTGCAA GCGCCGCATG
TACACCAACC CGCTGCGTGT GCTTGATTCG AAGAATCCTG ATGTACAAGC GATTTTAGGT
GATGCCCCTC AGCTCTCTGA TTATCTCGAT GCTGAATCAA AACAACATTT TGCGGGCTTG
TGTGAACTTC TGGATGCGGC GGGTATCGAA TACACGGTAA ATCAACGTTT AGTTCGCGGC
CTTGATTATT ACAACCGCAC GGTTTTTGAG TGGATCACCG AAAGTCTGGG ATCGCAAGGT
ACCGTTTGTG GCGGCGGCCG CTATGATGGC TTGGTTGAAC AACTGGGCGG TAAACCAACC
CCTGCGGTAG GTTTCGCTAT GGGCCTAGAG CGTTTAGTGC TGATGATGGA AACACTCGGT
AATACGGATG TCCGTCGCAG CGTAGATGTG TATATGGTTA CTGCAGGTGA AGGCACCATG
ATGGCGGGAA TGAAGCTTGC GGAACAGTTA CGTGAGCAAG TGCCCGGCCT ACGTGTGATG
ACTCACTTCG GTGGCGGCAA TTTTAAAAAG CAATTTAAAC GCGCGGATAA AGTGGGCGCA
GCGATTGCCT TGGTTTTGGG TGAAGATGAA GTTGCAGCCC AAACCGTTGT GGTAAAAGAT
TTGGCGGGAG GCGAGCAAAA TACTGTTGCC CAAGCTGAAG TAGCTAAACT ACTGGCACAT
TTAGCCTAA
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| Protein sequence | MAKTIQAIRG MNDCLPTQSP LWQKVEGVVK NVISAYGYSE VRMPIVEMTH LFSRAIGEVT
DVVEKEMYTF EDRNGDSLTL RPEGTAGCVR SGIENGLLYN QEQRLWYMGP MFRHERPQKG
RYRQFHQCGV EVFGLDGPDV DAELIMMTAR LWRELGIAQH VRLELNSIGS LEARANYRTA
LIDYLEQYQN VLDEDCKRRM YTNPLRVLDS KNPDVQAILG DAPQLSDYLD AESKQHFAGL
CELLDAAGIE YTVNQRLVRG LDYYNRTVFE WITESLGSQG TVCGGGRYDG LVEQLGGKPT
PAVGFAMGLE RLVLMMETLG NTDVRRSVDV YMVTAGEGTM MAGMKLAEQL REQVPGLRVM
THFGGGNFKK QFKRADKVGA AIALVLGEDE VAAQTVVVKD LAGGEQNTVA QAEVAKLLAH
LA
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