Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0286 |
Symbol | |
ID | 5135450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 299279 |
End bp | 300400 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640531744 |
Product | ribosomal RNA large subunit methyltransferase N |
Protein accession | YP_001216242 |
Protein GI | 147675306 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0016411 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACAG AAAAAGTCAA TCTACTCGAT TTTGACCGCA AGGGTTTGCG CACGTTTTTT GCCGAAGAAC TGGGTGAGAA AGCGTTTCGT GCCGAGCAGG TCATGAAGTG GATTTATCAC TTTGGTTGTG ATGACTTCGA TCAAATGAAT AACATCAACA AGCAGCTGCG TGAAAAGCTC AAAGCCAAGT GTGAGATCCG TGCACCTTAT GTCTCGGAAG CGCAACACTC GGCGGATGGC ACCATCAAGT GGGCAATGCG TGTGGGTGAT CAGGATGTAG AAACGGTTTA CATTCCCGAA GATGATCGCG CGACCTTATG TGTATCTTCC CAAGTAGGGT GTGCGTTGGA ATGCAAATTC TGCTCAACGG CGCAGCAAGG TTTTAACCGT AACCTACGCG TTTCAGAAAT CATTGGTCAG GTTTGGCGTG CGGCACGTGA AATCGGTCTA GAGAAAGAAA CTGGGCGTCG TCCTATCACT AACGTGGTGA TGATGGGCAT GGGTGAGCCT TTGCTCAACA TGAAAAACCT CATCCCAGCG TTAGAGATCA TGCTCGATGA TCTCGGTTTT GGTCTTTCTA AGCGCCGTGT GACCGTTTCT ACCTCTGGTG TGGTTTCTGG TTTAGAGCAG ATGATTGGCC AAATCGATGT GGCTTTGGCT ATCTCATTGC ATGCGCCGAA TGACAAGCTG CGTAGCGAAA TCATGCCGAT CAACGATCGC TGGAATATCG AAGCGTTTTT AGAGGTGGTG CGTCGCTATA TTGCATCCTC AAATGCTAAC CGCGGTAAGG TGACCGTTGA GTATGTGCTG CTGGATCATG TGAACGATGG TACAGAGCAT GCTCACGAGT TGGCGGAATT ACTGAAAAGG ACGCCTTGTA AAATTAACCT GATCCCGTTT AACCCTTATC CGGGCTCACC CTACAAGAAG CCAAGTAATT CACGCATCGA CCGTTTCCAG AAAACCTTGA TGCAATATGA GCATACCGTC ACCATTCGTA AAACTCGTGG TGATGACATT GATGCGGCAT GTGGGCAGTT GGTGGGAGAT GTCATTGATC GCACTAAACG AACCAAAGCT AAACAATTTG ATGGACAAGC GATTCCAGTG AAAACACTGT AA
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Protein sequence | MTTEKVNLLD FDRKGLRTFF AEELGEKAFR AEQVMKWIYH FGCDDFDQMN NINKQLREKL KAKCEIRAPY VSEAQHSADG TIKWAMRVGD QDVETVYIPE DDRATLCVSS QVGCALECKF CSTAQQGFNR NLRVSEIIGQ VWRAAREIGL EKETGRRPIT NVVMMGMGEP LLNMKNLIPA LEIMLDDLGF GLSKRRVTVS TSGVVSGLEQ MIGQIDVALA ISLHAPNDKL RSEIMPINDR WNIEAFLEVV RRYIASSNAN RGKVTVEYVL LDHVNDGTEH AHELAELLKR TPCKINLIPF NPYPGSPYKK PSNSRIDRFQ KTLMQYEHTV TIRKTRGDDI DAACGQLVGD VIDRTKRTKA KQFDGQAIPV KTL
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