Gene VC0395_A0280 details

Gene Information

• Locus tag: VC0395_A0280
• Symbol: hscB
• ID: 5136958
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 293980
• End bp: 294495
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640531738
• Product: co-chaperone HscB
• Protein accession: YP_001216236
• Protein GI: 147673271
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1076] DnaJ-domain-containing proteins 1
• TIGRFAM ID: [TIGR00714] Fe-S protein assembly co-chaperone HscB

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.0282071
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTATT TTGAATTATT TGGGCTGCCG ATCCAGTTTG AACTGGATGG TAGCCTTCTT 
TCTTCTCAGT TCAGAGCGTT GCAGAAACGA TTCCATCCGG ATAATTTTGC TACCGCTTCT 
GAGCGTGACC GCCTAATGGC AGTGCAGCAA GCCGCGCAAA TTAACGATGC GTATCAGACA 
CTGAAAGATC CACTCCGCCG CGCGGAATAT CTTTTGTCGT TACAAGGCAT AGAGATGAAC 
GCTGAGCAGC AGACGCTGCA AGATCCGATG TTTCTGATGG AACAGATGGA GCTACGCGAA 
GAGCTAGAGT CCGTGACGGC TTGTGCAGAT CCAGAGGCCG CCTTAGTCGC TTTTGACACT 
AAGGTAACCG CGATGCAGCG TCATTATCTC GCACAGCTAC AAGGCCAATT AGCTCAAAGT 
GAGTGGTTAG CGGCGGCTGA TCAGATCAGA AAGCTCAAAT TTATTGCCAA ACTCAAAAAT 
GAAGTAGAAC GAGTCGAAGA CCAACTGCTT GGCTAA 

 

Protein sequence

MNYFELFGLP IQFELDGSLL SSQFRALQKR FHPDNFATAS ERDRLMAVQQ AAQINDAYQT 
LKDPLRRAEY LLSLQGIEMN AEQQTLQDPM FLMEQMELRE ELESVTACAD PEAALVAFDT 
KVTAMQRHYL AQLQGQLAQS EWLAAADQIR KLKFIAKLKN EVERVEDQLL G