| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0277 |
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| Symbol | |
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| ID | 5136717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 291913 |
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| End bp | 293127 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640531735 |
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| Product | cysteine desulfurase |
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| Protein accession | YP_001216233 |
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| Protein GI | 147674054 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0284858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTGC CTATTTATCT AGATTATTCA GCGACATGCC CGGTTGATCC GCGCGTAGCT
GAAAAAATGG TTCAGTACAT GACGATGGAT GGTACCTTCG GTAACCCAGC TTCGCGCTCG
CACCGTTATG GCTGGCAGGC AGAAGAAGCG GTAGACACTG CGCGTGAGCA AATCGCAGCC
CTGCTGAATG CAGACCCACG TGAAATTGTG TTCACTTCGG GTGCTACTGA ATCTGACAAC
CTCGCGATCA AAGGTGTTGC TCACTTCTAT AACAAGCAAG GCAAGCACAT CATCACCAGC
AAAACCGAAC ACAAAGCGGT ACTGGATACC ATGCGCCAAT TGGAGCGTGA AGGCTTTGAA
GTGACTTATC TTGATCCAGA AAGCAATGGC TTGGTTGATC TGGCTAAGCT TGAAGCCGCG
ATGCGTGATG ACACTATTTT GGTTTCTATC ATGCACGTGA ACAATGAAAT CGGCGTGGTG
CAAGATATCG CAGCGATCGG CGAACTGTGC CGTTCACGTA AAGTGGTGTT CCATGTTGAT
GCAGCGCAAT CCGCGGGTAA AGTGGCTATT GATGTCCAAG AGATGAAGGT TGATCTGATT
TCTCTTTCTG CGCACAAAGC TTACGGCCCG AAAGGTATTG GTGCTTTGTA TGTTCGCCGT
AAACCACGTA TTCGTCTTGA AGCACAAATG CACGGTGGTG GTCATGAACG TGGTTTCCGT
TCTGGTACTC TGCCGACTCA CCAAATTGTG GGTATGGGTG AAGCGTTCCG TATCGCGAAG
GAAGAGCTGC AGCAAGATTA CGATCACGCA CTGAAGCTGC GTAATCGTCT GCTTGATGGC
ATTAAAGATA TGGAAGCCGT GACCATTAAC GGTGATCTGG ATCAGCGTGT ACCACACAAT
CTCAACGTCA GTTTTGCGTT TGTAGAAGGT GAATCTCTGC TGATGGCACT GAAAGATCTG
GCTGTATCGT CAGGCAGTGC ATGTACTTCA GCCAGCCTTG AGCCTTCTTA CGTATTGCGC
GCTCTGGGTC TTAACGATGA ACTGGCACAC AGCTCAATTC GCTTCTCTTT TGGTCGTTTC
ACGACCGAAG CAGAGATTGA TTATGCGATC GAACTGATCC GCGTAGCAGT GGATAAACTG
CGTGCGATGT CTCCACTTTG GGACATGTAC AAAGACGGCG TAGATCTGAA CACGGTTGAG
TGGGCACACC ACTAA
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| Protein sequence | MKLPIYLDYS ATCPVDPRVA EKMVQYMTMD GTFGNPASRS HRYGWQAEEA VDTAREQIAA
LLNADPREIV FTSGATESDN LAIKGVAHFY NKQGKHIITS KTEHKAVLDT MRQLEREGFE
VTYLDPESNG LVDLAKLEAA MRDDTILVSI MHVNNEIGVV QDIAAIGELC RSRKVVFHVD
AAQSAGKVAI DVQEMKVDLI SLSAHKAYGP KGIGALYVRR KPRIRLEAQM HGGGHERGFR
SGTLPTHQIV GMGEAFRIAK EELQQDYDHA LKLRNRLLDG IKDMEAVTIN GDLDQRVPHN
LNVSFAFVEG ESLLMALKDL AVSSGSACTS ASLEPSYVLR ALGLNDELAH SSIRFSFGRF
TTEAEIDYAI ELIRVAVDKL RAMSPLWDMY KDGVDLNTVE WAHH
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