| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0275 |
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| Symbol | |
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| ID | 5136548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 290516 |
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| End bp | 291250 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640531733 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_001216231 |
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| Protein GI | 147675237 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00988641 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTTAG AACGCGTGAA AGTCGTATTG GTCGGCACAA CTCACTCTGG AAATATTGGT
TCGGCCGCTC GGGCGATGAA AGTCATGGGG CTGAGCCAGA TGGTGCTGGT CGATCCGCAG
TGTCAGGTTG ATGCTCAAGC GATCGCGTTA GCCGCAGGGG CAAGTGAAAT TGCACTCAAT
GCGCAAATTT ATCCAACGCT GGAAGCCGCC GTTGCTGATT GTGGGTTAGT CGTGGGCACC
AGTGCGCGTT CACGCACCCT TGAATGGCCA ATGCTTGAGC CACGCGAGTG CGGAGAAAAA
CTCATCAGCG AAGCCAACCA ACATAGTGTG GCTATGGTGT TTGGTCGTGA ACGTACTGGC
TTGACCAATG ATGAGCTGCA ACTGTGTCAC TACCACGTAT GCGTGCCTGC GAATCCAGAA
TACAGCTCAC TGAATTTAGC AATGGCGGTT CAACTGCTGA GTTATGAAGT GCGGATGGCC
TATCTTGCTT TGCAGCAGAG CTCGCAAAGC AGCACATTGC AGGAAGAGTA TCCGCGTCAT
CAAGAGTTGG AGCGTTTTTA TGCCCATCTT GAACAAGTGA TAATGCAAAC CGAGTTTATT
TCTGCGCAGC AGCCGGGGCA GGTGATGAAT AAACTGCGCC GCATGTTTAC GCGCGCTCGG
CCAGAAGCTC AAGAAATCAA TATCTTGCGT GGGATCTTAA CGTCAGTACA AAAGTCAATC
TCACGCAAAG AATAA
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| Protein sequence | MMLERVKVVL VGTTHSGNIG SAARAMKVMG LSQMVLVDPQ CQVDAQAIAL AAGASEIALN
AQIYPTLEAA VADCGLVVGT SARSRTLEWP MLEPRECGEK LISEANQHSV AMVFGRERTG
LTNDELQLCH YHVCVPANPE YSSLNLAMAV QLLSYEVRMA YLALQQSSQS STLQEEYPRH
QELERFYAHL EQVIMQTEFI SAQQPGQVMN KLRRMFTRAR PEAQEINILR GILTSVQKSI
SRKE
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