| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0270 |
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| Symbol | tgt |
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| ID | 5137852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 284951 |
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| End bp | 286090 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640531728 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_001216226 |
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| Protein GI | 147674126 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.147453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAATTAA AATTTGAACT GAAAAAGAAA AACGGTAATG CCCGTCGTGG TCAATTGATT
TTTGAACGCG GCACAGTGCA AACCCCTGCG TTTATGCCCG TAGGTACTTA CGGCACGGTA
AAAGGGATGA CCCCTGAAGA AGTGAAAGAG ACCGGCGCAC AAATTCTGCT CGGTAACACT
TTCCACCTCT GGCTGCGCCC TGGCCAAGAA GTGATGAAAA TGCACGGTGA CTTGCACGAT
TTCATGAACT GGCAAGGTCC TATCCTGACT GACTCTGGTG GTTTTCAGGT ATTCAGCTTA
GGCGATATCC GTAAGATCAC CGAAGAAGGC GTGCATTTCC GCAACCCAGT AAACGGCGAC
AAAATCTTTA TGGACGCCGA GAAATCGATG GAAATCCAAA AAGATTTGGG TTCAGACATC
GTGATGATTT TTGACGAGTG TACGCCATAC CCAGCGACCC ACGATGAAGC GAAAAAATCG
ATGGAAATGT CTCTGCGTTG GGCAAAACGT TCGCGTGACC ACTTCGATAA GCTCGAAAAC
CCGAACAACC TGTTTGGTAT CGTACAGGGT GGTGTGTATG AAGATTTGCG TGATGTATCG
GTAAAAGGCC TGACGGAAAT CGGTTTTGAT GGTTATGCTG TGGGTGGTCT TGCGGTGGGT
GAGCCGAAAG AAGACATGCA TCGTGTACTG GAACATACCT GTCCACAACT GCCGGAAGAC
AAGCCACGTT ATCTGATGGG CGTCGGTAAA CCGGAAGACT TGGTGGAAGG TGTGCGTCGT
GGTATCGACA TGTTTGACTG TGTGATGCCA ACGCGTAACG CACGTAACGG TCACCTGTTT
GTGACGGGTG GTGTGATCAA GATCCGTAAT GCAGCACATA AAACCGATAC AACACCACTG
GATCTGCATT GCGACTGTTA CACTTGCAAA AATTATTCGA AGTCATACCT GCATCATTTG
GATCGCTGTA ACGAAATCCT CGGTGCACGC TTGAATACCA TCCATAACCT GCGTTACTAC
CAACGCTTGA TGGAAAGCAT TCGTAAAGCG ATTGATGAAG ACCGTTTTGA CCAATTTGTA
GCCGAGTTCT ACGCGCGTCG TAACCGCGAA GTGCCACCAC TACAAAAAGA CAAAGCCTGA
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| Protein sequence | MKLKFELKKK NGNARRGQLI FERGTVQTPA FMPVGTYGTV KGMTPEEVKE TGAQILLGNT
FHLWLRPGQE VMKMHGDLHD FMNWQGPILT DSGGFQVFSL GDIRKITEEG VHFRNPVNGD
KIFMDAEKSM EIQKDLGSDI VMIFDECTPY PATHDEAKKS MEMSLRWAKR SRDHFDKLEN
PNNLFGIVQG GVYEDLRDVS VKGLTEIGFD GYAVGGLAVG EPKEDMHRVL EHTCPQLPED
KPRYLMGVGK PEDLVEGVRR GIDMFDCVMP TRNARNGHLF VTGGVIKIRN AAHKTDTTPL
DLHCDCYTCK NYSKSYLHHL DRCNEILGAR LNTIHNLRYY QRLMESIRKA IDEDRFDQFV
AEFYARRNRE VPPLQKDKA
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