Gene VC0395_A0269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0269 
SymbolqueA 
ID5137500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp283664 
End bp284722 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content50% 
IMG OID640531727 
ProductS-adenosylmethionine:tRNA ribosyltransferase-isomerase 
Protein accessionYP_001216225 
Protein GI147675363 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 
TIGRFAM ID[TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0286983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGTTT CAGATTTTCA TTTTGAACTC CCAGACGAGC TGATTGCTCG CTACCCAAAA 
GCAGAACGTA CCGCGAGCCG CTTGCTGCAG CTTGACGGCA ACAGTGGTCA ACTGGTGGAT
GGCACCTTTA AAGATGTCCT CGAACTGGTT GAACCGGGAG ATCTGCTGGT GTTTAACAAC
ACGCGAGTGA TCCCAGCTCG CATGTTTGGG CGCAAAGCCA GCGGTGGCAA ATTAGAAGTG
TTGGTAGAGC GTATGCTCGA TGAGCACACG ATTTTAGCGC ACGTTCGTTC ATCAAAACCG
CCCAAACCGG GTACTGAACT TTATTTAGGC GAGAACGATG AGTTTCATGC CGTGATGCAG
GCGCGTCACG ATGCGTTGTT TGAAATCCGT TTTACTGCGG AAACCGTGGT ATTGGATATT
CTCAATCAAA TTGGTCACAT GCCGTTGCCA CCTTACATCG ACCGTCCTGA TGAAGAGACA
GATAAAGAGC GTTATCAAAC GGTGTACAAC CAAAAGCCGG GTGCGGTAGC TGCCCCAACG
GCGGGTTTGC ATTTTGACCA AGCGCTGCTT GAGCAGATCC AAGCCAAAGG CGTTGAGTTG
GCGTATGTGA CACTGCATGT TGGCGCGGGG ACCTTCCAGC CTGTGCGGGT GGAAAATATT
CACGATCACC ATATGCATGC GGAATACGTT GAAGTGCCAC AAGAAGTGGT GGATGCGATT
GCGGCGACCA AAGCGCGTGG TGGTCGAGTG GTTGCTGTGG GTACCACCTC AGTACGTTCA
CTCGAAAGTG CGGCGCAAGA TGCGCTGCAA AAAGGCACCG AGTTAAAGCC ATTTTTTGGT
GATACCGAAA TCTTCATCTT CCCGGGGTAT CAATACCAGT TGGTGGATTG CTTGATCACC
AATTTCCACT TGCCTGAATC GACCTTGATC ATGCTGGTGA GTGCGTTTGC AGGTTATGAG
CACACCATGG CCGCTTATGA ACATGCGGTC AAAGAGCAAT ATCGCTTCTT TAGTTACGGC
GATGCGATGT TTATTCGTAA GCAGACGACT AAAGCGTAA
 
Protein sequence
MQVSDFHFEL PDELIARYPK AERTASRLLQ LDGNSGQLVD GTFKDVLELV EPGDLLVFNN 
TRVIPARMFG RKASGGKLEV LVERMLDEHT ILAHVRSSKP PKPGTELYLG ENDEFHAVMQ
ARHDALFEIR FTAETVVLDI LNQIGHMPLP PYIDRPDEET DKERYQTVYN QKPGAVAAPT
AGLHFDQALL EQIQAKGVEL AYVTLHVGAG TFQPVRVENI HDHHMHAEYV EVPQEVVDAI
AATKARGGRV VAVGTTSVRS LESAAQDALQ KGTELKPFFG DTEIFIFPGY QYQLVDCLIT
NFHLPESTLI MLVSAFAGYE HTMAAYEHAV KEQYRFFSYG DAMFIRKQTT KA