| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0266 |
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| Symbol | aceB |
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| ID | 5135210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 279659 |
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| End bp | 281329 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640531724 |
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| Product | malate synthase |
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| Protein accession | YP_001216222 |
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| Protein GI | 147675709 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01344] malate synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00405334 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCTTGG TGAGTGTTTC AAGGAAGGAA TTTATGTCAA TCAATACTGC TGAATTAACC
CAACACACCA CGGAAACCAA AATCACCCAA GGCAAGCTTG CTGTGGTGGG TACCCTTTCA
CCCGAACATC AAGCGATTTT CCCTGTCGAA GCCCAAACTT TTTTACAGCA ACTCTGTGAG
CGCTTTGCGC CGCGAGTTGA TGAATTGCTG AACTTGCGTG AACAAAAACA AACGCTTATC
GACCAAGGCC AGCTACCTGA TTTTCTTGCC GAAACCAAAG ATATCCGTGA AGGAAGCTGG
AAGATTCTCG GCATTCCAGA CGATCTGCAA GATCGTCGCG TAGAGATCAC GGGGCCAATC
GATCGCAAAA TGGTGATTAA TGCACTGAAC GCGAATGTGA AAGTCTTTAT GGCTGACTTT
GAAGATTCGA TGTCGCCCGC GTGGGACAAG GTGTTGGATG GGCAGATCAA CCTGCGTGAT
GCGATTCTGG GCTGCATAAG CTATACCAAC CCAGATAATG GCAAGCGTTA TGAGCTCAAT
GCCAACCCAG CGGTGCTTAT CTGCCGCGTG CGCGGTCTGC ATCTCAAAGA AAAACATGTC
ACTTACAACG GCTTGGCGAT TCCCAGTTCA CTGTTCGATT TTGCGCTCTA TTTTTACAAC
AACCATCGCG CACTGTTGAA AAAAGGCAGT GGCCCTTATT TCTACCTACC TAAGCTGCAA
GCTTATCAAG AGGCGCAGTG GTGGAGTGAC GTGTTCCATT TCACGGAAGA TTATTTTGGT
TTAGACACAG GCACCATCAA AGCAACAGTG TTGATTGAAA CTCTGCCTGC GGTATTTCAG
ATGGATGAGA TCCTCTTCTC ACTCAAAGAG CACATTGTCG GTCTGAACTG TGGACGCTGG
GATTATATTT TCAGCTACAT CAAAACCTTG AAAAAGCATC CCGACCGCGT ATTGCCGGAT
CGCCAAGTGG TGACCATGGA TAAGCCTTTC CTCAATGCGT ATTCCCGTTT GTTGATTTAC
ACCTGTCATA AACGCGGCGC GTTTGCGATG GGCGGGATGG CGGCGTTTAT TCCAGCCAAA
GATCCTGCGC TCAATGAGCA AGTGCTACAA AAAATTCGCG GCGACAAAAT GCTTGAAGCG
ACCAATGGCC ACGATGGCAC TTGGGTTGCT CACCCCGGTT TAGCGGATAC CGCGATGGCG
GTGTTTAACG AAGTGCTTGG TGAGCGCAAA AACCAACTCA ATGTAAGCCG AATGGCCGAT
GCTCCGATAA CCGCGGCCGA TCTATTGGCA CCTTGCGATG GGCCACGCTC TGAGCATGGC
ATGCGCCACA ACATTCGCGT TGCGTTGCAA TACATCGAAG CATGGATTTC TGGTAACGGT
TGTGTGCCGA TCTACGGCTT GATGGAAGAT GCGGCGACAG CGGAGATTTC ACGCGCTTCG
ATTTGGCAAT GGATCCAACA CGGCAAAACG TTAGATAACG GGCAAGTGGT CACTAACGAA
CTGTTTCGCG ACTACCTCAA ACAAGAGATT GAGGTGGTGA AAAGTGAAGT GGGTGAGTCC
CGTTTTGCAC AAGGGCGTTT TACTGAAGCG GCCGAATTGA TGGAGCGCTT AACGACCAGT
CAAGAGCTAC CGAATTTCTT AACCATACCG GGCTACGACT ACTTGCCGTA G
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| Protein sequence | MFLVSVSRKE FMSINTAELT QHTTETKITQ GKLAVVGTLS PEHQAIFPVE AQTFLQQLCE
RFAPRVDELL NLREQKQTLI DQGQLPDFLA ETKDIREGSW KILGIPDDLQ DRRVEITGPI
DRKMVINALN ANVKVFMADF EDSMSPAWDK VLDGQINLRD AILGCISYTN PDNGKRYELN
ANPAVLICRV RGLHLKEKHV TYNGLAIPSS LFDFALYFYN NHRALLKKGS GPYFYLPKLQ
AYQEAQWWSD VFHFTEDYFG LDTGTIKATV LIETLPAVFQ MDEILFSLKE HIVGLNCGRW
DYIFSYIKTL KKHPDRVLPD RQVVTMDKPF LNAYSRLLIY TCHKRGAFAM GGMAAFIPAK
DPALNEQVLQ KIRGDKMLEA TNGHDGTWVA HPGLADTAMA VFNEVLGERK NQLNVSRMAD
APITAADLLA PCDGPRSEHG MRHNIRVALQ YIEAWISGNG CVPIYGLMED AATAEISRAS
IWQWIQHGKT LDNGQVVTNE LFRDYLKQEI EVVKSEVGES RFAQGRFTEA AELMERLTTS
QELPNFLTIP GYDYLP
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