Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0263 |
Symbol | cutC |
ID | 5136822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 276277 |
End bp | 277041 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640531721 |
Product | copper homeostasis protein |
Protein accession | YP_001216219 |
Protein GI | 147673970 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3142] Uncharacterized protein involved in copper resistance |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.112449 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATATC AAGTTGAAGT CTGTATCGAC AATATCGAAT CCCTGCATAA CGCCATCGCG GGAGGCGCAA CCCGTATTGA GCTTTGTTCA TCCCTTGCGC TAGGTGGATT AACCCCTAGT GCCGGGTTGA TGTACAGCGC AGGCAGAGTG TCACCGATTC CGGCTTACGC AATGATCAGA CCAAGAGAAG GGGATTTTTT CTATCACGAT GATGAACTCA GCATTATGGC GCAGGACATT CGTACGGCGC ATCAAGCAAA CTTACAAGGC GTGGTACTAG GGTTACTCAA TGCCGATGGC ACGATTGATG TGAAACGCAG CAAACCTTTA ATCGAACTTG CTCACTCCCT CGGGTTAGGT GTGACGTTTC ACCGCGCATT TGACCACTGT GTAAACCCTG AACACGCGTT AGAAGAGATC ATTGCGCTCG GTTGTGAACG CATTTTGACC TCAGGCTTGG CGCGCAACGC TTATCTGGGT ATTGAACGTT TAGCGCAACT GGTCAAACAG AGTGCTGGGC GCATTTCAAT CATGGCAGGC GCTGGGATCA ATGCGCAGAA TGTGGCTGAA ATTGCGTTAG CCACCGGGGT CAATGAGCTG CATTTATCCG CGAAAACCAC GCGTCCGAGC GAGATGCTGT TTATTCGCTC GGAGAGCAAA ATGGGCGCGG CGGACTGTGA TGATTTTATT ATCCCGGTGA CCAGCCGCGA TGCGTTACAG CAAACCGTAC ACGCTCTGGC AGCACTCAAT TCTGTCCTAC ATTAA
|
Protein sequence | MKYQVEVCID NIESLHNAIA GGATRIELCS SLALGGLTPS AGLMYSAGRV SPIPAYAMIR PREGDFFYHD DELSIMAQDI RTAHQANLQG VVLGLLNADG TIDVKRSKPL IELAHSLGLG VTFHRAFDHC VNPEHALEEI IALGCERILT SGLARNAYLG IERLAQLVKQ SAGRISIMAG AGINAQNVAE IALATGVNEL HLSAKTTRPS EMLFIRSESK MGAADCDDFI IPVTSRDALQ QTVHALAALN SVLH
|
| |