Gene VC0395_A0263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0263 
SymbolcutC 
ID5136822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp276277 
End bp277041 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content51% 
IMG OID640531721 
Productcopper homeostasis protein 
Protein accessionYP_001216219 
Protein GI147673970 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3142] Uncharacterized protein involved in copper resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.112449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATC AAGTTGAAGT CTGTATCGAC AATATCGAAT CCCTGCATAA CGCCATCGCG 
GGAGGCGCAA CCCGTATTGA GCTTTGTTCA TCCCTTGCGC TAGGTGGATT AACCCCTAGT
GCCGGGTTGA TGTACAGCGC AGGCAGAGTG TCACCGATTC CGGCTTACGC AATGATCAGA
CCAAGAGAAG GGGATTTTTT CTATCACGAT GATGAACTCA GCATTATGGC GCAGGACATT
CGTACGGCGC ATCAAGCAAA CTTACAAGGC GTGGTACTAG GGTTACTCAA TGCCGATGGC
ACGATTGATG TGAAACGCAG CAAACCTTTA ATCGAACTTG CTCACTCCCT CGGGTTAGGT
GTGACGTTTC ACCGCGCATT TGACCACTGT GTAAACCCTG AACACGCGTT AGAAGAGATC
ATTGCGCTCG GTTGTGAACG CATTTTGACC TCAGGCTTGG CGCGCAACGC TTATCTGGGT
ATTGAACGTT TAGCGCAACT GGTCAAACAG AGTGCTGGGC GCATTTCAAT CATGGCAGGC
GCTGGGATCA ATGCGCAGAA TGTGGCTGAA ATTGCGTTAG CCACCGGGGT CAATGAGCTG
CATTTATCCG CGAAAACCAC GCGTCCGAGC GAGATGCTGT TTATTCGCTC GGAGAGCAAA
ATGGGCGCGG CGGACTGTGA TGATTTTATT ATCCCGGTGA CCAGCCGCGA TGCGTTACAG
CAAACCGTAC ACGCTCTGGC AGCACTCAAT TCTGTCCTAC ATTAA
 
Protein sequence
MKYQVEVCID NIESLHNAIA GGATRIELCS SLALGGLTPS AGLMYSAGRV SPIPAYAMIR 
PREGDFFYHD DELSIMAQDI RTAHQANLQG VVLGLLNADG TIDVKRSKPL IELAHSLGLG
VTFHRAFDHC VNPEHALEEI IALGCERILT SGLARNAYLG IERLAQLVKQ SAGRISIMAG
AGINAQNVAE IALATGVNEL HLSAKTTRPS EMLFIRSESK MGAADCDDFI IPVTSRDALQ
QTVHALAALN SVLH