Gene VC0395_A0249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0249 
Symbolfrp 
ID5137203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand+ 
Start bp259261 
End bp259983 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content46% 
IMG OID640531707 
Productnitroreductase A 
Protein accessionYP_001216205 
Protein GI147675451 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.807471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCTG TTATTGATAC CATACTTAGC CATCGTTCTA TTCGTGCTTT TACCCAAGAG 
CCTATTTCTG CAACGCAACT TGAGACGATC ATTGCTTCTG GTATTGCAGC TTCGTCATCC 
AGCTTACTGC AAGTGATCTC GGTGATCCGA GTGACCGATG GCAGTATGCG TGAGCAATTA 
GCAGAGTTTG CTGGCAATCA AGCTTATGTG GCGAGTGCGG CTGAGTTCTT AGTATTTTGC 
ATTGATTATC AGCGGCACTA TGCATTGAAT CCGAACGTAA AACCTGAATT CATGGAGCTC 
ACTTTAATCG GTGCTGTTGA TGCGGGGATT ATGGCGCAAA ACTGTTTGTT AGCGGCAGAG 
TCGATGGGGT TAGGTGGTGT CTATATTGGT GGTTTACGTA ATTCACCGAA TGAAGTCGAT 
GCTTTGCTTA ACTTGCCGCC TTATACCGCG GTATTGTTTG GTATGTGTTT AGGGCACCCA 
GCTCAGGAGC CAGAGTTAAA ACCGCGCTTG GCTCCGAAGG TGATCTTGCA TGAAAACCAC 
TACCAGCCTT TGAATAAAGA GGATGTCGCA GAATATGACC GAACCATGGT TGAGTATTAC 
CAAAAACGTT CCGGTAATCC TAAACAGCAG GGATGGTCAG AACAAATTAC CGCTAAGCTT 
TCTGAAGAGT CTCGGCCATT TATGCTCAGC TATTTGCAGC GTAAAGGATT AGCTCTGAAG 
TAA
 
Protein sequence
MNPVIDTILS HRSIRAFTQE PISATQLETI IASGIAASSS SLLQVISVIR VTDGSMREQL 
AEFAGNQAYV ASAAEFLVFC IDYQRHYALN PNVKPEFMEL TLIGAVDAGI MAQNCLLAAE 
SMGLGGVYIG GLRNSPNEVD ALLNLPPYTA VLFGMCLGHP AQEPELKPRL APKVILHENH 
YQPLNKEDVA EYDRTMVEYY QKRSGNPKQQ GWSEQITAKL SEESRPFMLS YLQRKGLALK