| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0240 |
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| Symbol | clpB-1 |
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| ID | 5137276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 250451 |
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| End bp | 253024 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531700 |
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| Product | clpB protein |
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| Protein accession | YP_001216203 |
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| Protein GI | 147675005 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000492438 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCTTG ACAGATTTAC GAGCAAATTT CAGATCGCGA TTTCCGATGC CCAGTCATTA
GCGCTCGGCC GTGATCATCA ATATATCGAA CCTGTGCACC TGATGGTGGC TCTGCTGGAT
CAAAACGGCA GCCCGATCCG CCCATTACTC ACCATGCTTA ATGTGGATGT GATGCAACTG
CGCTCCAAAC TTGGCGAAAT GCTCGATCGT TTACCCAAAG TCAGTGGTAT TGGTGGTGAT
GTACAGCTCT CTTCGGCGCT TGGCTCGCTG TTTAATCTGT GTGATAAGGT TGCGCAAAAG
CGTCAAGATG CCTACATCTC CTCTGAAATT TATCTCCTCG CCGCTTTGGA AGATAAAGGT
CCACTTGGAA CCTTGCTCAA AGAGTTCGGG CTGACCGAGA AAAAAGTCTC TGATGCAATT
GAAAAAATTC GTGGAGGCCA GAAGGTCTAT GACCCGAATG CGGAAGAGCT GCGTCAAGCG
TTGGAAAAAT TCACCATCGA TCTCACTGAA CGCGCTGAGC AGGGCAAACT CGATCCTGTG
ATCGGTCGTG ATGATGAAAT TCGCCGCACC ATTCAAGTGC TGCAGCGTCG TACCAAAAAC
AACCCAGTGA TCATCGGTGA ACCCGGTGTG GGTAAAACTG CGATTGTGGA AGGCTTGGCG
CAGCGCATCA TTAATAATGA AGTACCAGAA GGCCTGCGTG GACGCCGCGT ATTGTCTTTA
GATATGGGCG CGCTGGTGGC TGGGGCGAAA TACCGCGGCG AATTTGAAGA GCGCTTGAAA
TCAGTACTCA ATGAGCTAGC GAAAGAAGAA GGCAATATCA TCCTCTTCAT TGATGAGCTG
CACACCATGG TTGGTGCGGG GAAAGGCGAA GGCTCGATGG ATGCTGGCAA CATGCTCAAA
CCCGCTTTGG CGCGTGGAGA ATTGCACTGT GTCGGCGCAA CCACTTTAGA TGAGTACCGC
CAATACATCG AAAAAGATCC AGCGTTAGAG CGCCGCTTCC AAAAAGTGTT GGTGGATGAG
CCCACGGTGG AAGATACCAT CGCCATCTTG CGTGGATTGA AAGAGCGTTA CGAACTGCAT
CACCATGTCG AAATCACAGA TCCAGCGATT GTGGCGGCAG CGAGCCTATC GCATCGCTAT
ATTTCCGATC GCCAGTTGCC TGATAAAGCG ATCGATTTGA TCGATGAAGC GGCTTCAAGC
ATCCGGATGC AGATTGACTC CAAACCAGAA GCTCTGGATA AGCTTGAGCG CAAAATCATC
CAACTGAAAA TCGAGCAGCA AGCGCTCTCT AATGAGCACG ATGAAGCCAG TGAAAAACGC
TTGGCGATCT TAAATGAAGA GCTGCAAGAG AAAGAGCGTG ATTACGCGGA GTTGGAAGAA
GTGTGGAAAG CTGAAAAGGC GGCACTCTCC GGCACGCAAC ATATTAAAGC GGCACTTGAA
CAAGCGCGGA TGGATCTGGA AGTCGCTCGC CGTGCGGGGG ATTTGAACCG CATGTCAGAG
CTGCAATATG GTCGCATTCC AGAGCTAGAA AAGCAGCTTG ATCTGGCTGC GCAAGCCGAA
ATGCAGGAAA TGACTCTGCT ACGTAATAAA GTGACGGATG CAGAAATTGC CGAAGTGCTT
TCAAAACAGA CTGGCATTCC AGTATCAAAA ATGCTCGAAG CCGAGAAAGA AAAGTTGCTT
CGCATGGAAG AAGTGCTGCA TAAACGCGTG ATTGGTCAAA AAGAAGCGGT GGAAGTGGTC
GCGAATGCGA TTCGCCGCAG TCGCGCAGGC CTTTCTGATC CAAATCGTCC GATTGGCTCC
TTCTTATTCT TGGGGCCAAC AGGGGTCGGT AAAACCGAGC TGTGTAAAAC CTTGGCTAAC
TTCCTGTTTG ACAGTGAAGA TGCCATGGTA CGTGTGGATA TGTCGGAATT TATGGAGAAA
CACTCGGTTG CTCGTTTAGT CGGTGCGCCT CCAGGTTATG TCGGCTATGA AGAAGGTGGC
TACTTAACGG AAGCGGTGCG CCGTAAACCT TACTCGGTGA TTTTGCTCGA TGAAGTGGAA
AAGGCGCACC CAGATGTCTT CAATATTCTG CTGCAAGTCT TGGATGATGG CCGCTTGACG
GACGGGCAAG GGCGCACGGT TGATTTTCGA AATACCGTGG TGATCATGAC CTCCAACTTG
GGTTCAAGCC GTATCCAAGA AAATTTTGCA AGGTTGGATT ATCAAGGTAT CAAAGAACAA
GTGATGGACG TAGTCAGCAA ACACTTCCGC CCTGAGTTCT TGAACCGAGT GGATGAAAGT
GTGGTATTCC ATCCATTAGG ACAAGAGCAT ATTAAGTCTA TCGCCTCTAT TCAGTTGGCC
CGCCTACGTC AACGTTTGGC AGAGCGAGAT TACCAACTAG AGGTTGATGA TGAGGCGCTG
GATCTGATTG CTCATGTCGG CTTCGATCCG GTTTACGGTG CTCGTCCACT GAAACGCGCG
ATTCAGCAAA ATGTGGAAAA CCCACTGGCC AAATCTATTC TGGCTGGTAA GTTCCTGCCT
GGTTCACCTA TTTTACTATC GGTAAAAGAC GGGAATATTT TCGCAAGCCA GTAG
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| Protein sequence | MRLDRFTSKF QIAISDAQSL ALGRDHQYIE PVHLMVALLD QNGSPIRPLL TMLNVDVMQL
RSKLGEMLDR LPKVSGIGGD VQLSSALGSL FNLCDKVAQK RQDAYISSEI YLLAALEDKG
PLGTLLKEFG LTEKKVSDAI EKIRGGQKVY DPNAEELRQA LEKFTIDLTE RAEQGKLDPV
IGRDDEIRRT IQVLQRRTKN NPVIIGEPGV GKTAIVEGLA QRIINNEVPE GLRGRRVLSL
DMGALVAGAK YRGEFEERLK SVLNELAKEE GNIILFIDEL HTMVGAGKGE GSMDAGNMLK
PALARGELHC VGATTLDEYR QYIEKDPALE RRFQKVLVDE PTVEDTIAIL RGLKERYELH
HHVEITDPAI VAAASLSHRY ISDRQLPDKA IDLIDEAASS IRMQIDSKPE ALDKLERKII
QLKIEQQALS NEHDEASEKR LAILNEELQE KERDYAELEE VWKAEKAALS GTQHIKAALE
QARMDLEVAR RAGDLNRMSE LQYGRIPELE KQLDLAAQAE MQEMTLLRNK VTDAEIAEVL
SKQTGIPVSK MLEAEKEKLL RMEEVLHKRV IGQKEAVEVV ANAIRRSRAG LSDPNRPIGS
FLFLGPTGVG KTELCKTLAN FLFDSEDAMV RVDMSEFMEK HSVARLVGAP PGYVGYEEGG
YLTEAVRRKP YSVILLDEVE KAHPDVFNIL LQVLDDGRLT DGQGRTVDFR NTVVIMTSNL
GSSRIQENFA RLDYQGIKEQ VMDVVSKHFR PEFLNRVDES VVFHPLGQEH IKSIASIQLA
RLRQRLAERD YQLEVDDEAL DLIAHVGFDP VYGARPLKRA IQQNVENPLA KSILAGKFLP
GSPILLSVKD GNIFASQ
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