| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0237 |
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| Symbol | |
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| ID | 5136926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 247747 |
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| End bp | 248508 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640531697 |
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| Product | putative lipoprotein |
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| Protein accession | YP_001216200 |
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| Protein GI | 147675286 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.558058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAGCA AGATTTGCAA GGAACTCCAC CCTGACATGA AATACCAGAC TTTATCAGGC
CTACTCGCGT TATCCCTGTT ATTTGGTTGC TCTAGCAGCC CAGATGTGGT GCCAGATGTA
CCGCCATCAC AGCTGTACTC TGAAGCGCAA ACCGCTCTAC AAAGCGGAAC GTGGTTAACC
GCTATCGAAA AACTAGAGGC GCTCGATTCA CGCTATCCAT TTGGTGCTTA TTCAGAGCAA
GTACAGCTCG ATCTGATTTA TGCCTACTAC AAAAATGATG ATTTGGCCCT TGGCCTCGCG
ACCATCGAAC GTTTTACACG CCTTAATCCA ACCCATGAAA AAATGGATTG GGTACTCTAC
ATGCGCGGTT TGACGCACAT GGCGCAAGAT CGCAACTTCA TGCATGACTT GTTTAATATC
GATCGCCGTG ACCGCGATCC TGAACCCGTG AAAGCAGCCT TTGCGGATTT TAAGAAGCTG
CTCCAGCGTT ACCCAAACAG CCCATACGCA GAAGATGCGC AGCGTCGAAT GTTTGCGCTC
AAGAACCGTT TAGCGGAATA CGATTTAGCG ACCGCAGATT TCTACCTGCG CCGTGAAGCA
TGGATTGCGG CGATTAATCG CACTCAAGAG TTACAAAAAA CCTATCCAGA TACCGAAGCG
GCACGTCAAT CCTTAGAAAT CCAACTCGAG GCTTATCAGC AGCTTGGTTT AACCGACGCG
GTAGAGCGAA CTAAGCAGTT AATGCAGCTT AACCCTTTAT AA
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| Protein sequence | MKSKICKELH PDMKYQTLSG LLALSLLFGC SSSPDVVPDV PPSQLYSEAQ TALQSGTWLT
AIEKLEALDS RYPFGAYSEQ VQLDLIYAYY KNDDLALGLA TIERFTRLNP THEKMDWVLY
MRGLTHMAQD RNFMHDLFNI DRRDRDPEPV KAAFADFKKL LQRYPNSPYA EDAQRRMFAL
KNRLAEYDLA TADFYLRREA WIAAINRTQE LQKTYPDTEA ARQSLEIQLE AYQQLGLTDA
VERTKQLMQL NPL
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