Gene VC0395_A0231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0231 
Symbol 
ID5135579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp241118 
End bp241474 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content49% 
IMG OID640531691 
ProductTrp operon repressor 
Protein accessionYP_001216194 
Protein GI147673635 
COG category[K] Transcription 
COG ID[COG2973] Trp operon repressor 
TIGRFAM ID[TIGR01321] trp operon repressor, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTGCACT ACAATAAGCC GGTGTATCAC TTAACGAGTA CAACTATGGT ACAGCAACCT 
TCTTTTAGTG AGTGGCAGCA AGTGTTGGAT CTGGTTAAGC AAGCCGTGCA GCAAGATCAG
CACGAAATGC TACTGACCAT GTTGATGACG CCGGATGAGC GTGAAGCATT AGTAGCTCGA
GTGAATATTG TGCATGAGCT GCTGCAAGGC GAGCTCTCTC AGCGCCAAAT AAGCCAAATG
CTTGGGGTTG GGATTGCAAC CATCACGCGT GGTTCGAATG AGCTCAAGTC ACGGAGTGAA
GATGAGAAAG CGGCATTAGC TCAACTGCTT ATGCCGCCTC CATCCTCAGA AGCCTAA
 
Protein sequence
MLHYNKPVYH LTSTTMVQQP SFSEWQQVLD LVKQAVQQDQ HEMLLTMLMT PDEREALVAR 
VNIVHELLQG ELSQRQISQM LGVGIATITR GSNELKSRSE DEKAALAQLL MPPPSSEA