| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0226 |
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| Symbol | aroF |
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| ID | 5135273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 234311 |
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| End bp | 235384 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640531686 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_001216189 |
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| Protein GI | 147673285 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA GTGAATTGAG TGATGTGAAT ATCAGTGATG AACAGATATT GATCACCCCT
GATGCCTTAA AAGCCAAGAT TCCACTCAGT GACAAGGCGC GTAAGTTTAT TCGTGAGTCA
CGTCAGACGG TGGCGGACAT TATCCACAAA CGCGATCCTC GCTTGCTGAT CGTCTGTGGT
CCTTGCTCAA TTCATGATGT GGATGCGGCG AAAGAGTACG CCAAAAAACT CAAAGCACTC
TCGGCGCAGC TGAGCGACCA GCTCTACATC GTAATGCGCG TGTACTTTGA AAAACCGCGT
ACTACGGTCG GTTGGAAAGG GCTGATTAAC GATCCGCATC TTGATGGCAG TTTTGATATC
GAACACGGTC TGCATGTTGG GCGTCAACTC TTGGTCGATT TGGCCGAAAT GGAAATTCCA
CTGGCAACCG AAGCGTTGGA CCCGATTAGC CCGCAATACT TGGCGGATAC TTTTAGTTGG
GCGGCGATTG GTGCGCGCAC CACGGAATCA CAAACTCACC GCGAGATGGC AAGTGGCCTT
TCCATGCCAA TCGGCTTTAA AAATGGCACG GATGGTAACT TGGCAACGGC GATTAATGCC
ATGCAGGCCG CTTCATCCAG TCACCGCTTT ATGGGAATTA ACCGCGAAGG ACAAGTGGCA
CTGCTCACGA CACAAGGCAA CCCGAATGGG CATGTGATTT TACGTGGTGG CAAACAGACC
AATTACGATT CGGTTTCTGT CGCGGAATGT GAAGAAGAGA TGCAAAAAGC GCGTTTGGAA
CCCTCTTTGA TGGTGGATTG CAGCCATGCG AACTCACGTA AAGATTACCG CCGTCAGCCG
TTGGTGGCAG AAGATGTGAT TCATCAAATC CGTGAAGGCA ATCGCTCGAT CATTGGCCTG
ATGATTGAAA GCCATCTCAA TGAAGGAAAT CAGTCTTCGG GTCTGCCTCG TGAAAAGATG
CAATACGGAG TCTCGATCAC TGACGGCTGT ATAAATTGGT CAACGACTGA GGCATTATTA
CGTCGTGCGC ATCAGGAACT TATTCCCTTT TTGCACAATC GTTTGCAAGG ATAA
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| Protein sequence | MKKSELSDVN ISDEQILITP DALKAKIPLS DKARKFIRES RQTVADIIHK RDPRLLIVCG
PCSIHDVDAA KEYAKKLKAL SAQLSDQLYI VMRVYFEKPR TTVGWKGLIN DPHLDGSFDI
EHGLHVGRQL LVDLAEMEIP LATEALDPIS PQYLADTFSW AAIGARTTES QTHREMASGL
SMPIGFKNGT DGNLATAINA MQAASSSHRF MGINREGQVA LLTTQGNPNG HVILRGGKQT
NYDSVSVAEC EEEMQKARLE PSLMVDCSHA NSRKDYRRQP LVAEDVIHQI REGNRSIIGL
MIESHLNEGN QSSGLPREKM QYGVSITDGC INWSTTEALL RRAHQELIPF LHNRLQG
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