| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0225 |
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| Symbol | |
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| ID | 5137043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 232393 |
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| End bp | 234069 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640531685 |
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| Product | hypothetical protein |
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| Protein accession | YP_001216188 |
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| Protein GI | 147675427 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTCA TCCTCTCATT ACTGCAACAG ATGTGTGTTT ACCTTGTTCT CGCCTATATG
TTGAGTAAAA CGCCGATCTT CATTCCTTTA CTTAACATTT CTGGTCGGTT TGACCACAAA
ATCAGTGTTT ATGTTCTGTT TTCGCTGTTT TGCATTATGG GCACCTACTT TGGCCTGCAG
ATCAATGATG CGATTGCCAA TACGCGTGCC ATCGGCGCTG TGATGGGAGG TCTGTTTGGT
GGACCTGTGA TTGGTTTTGC GGTTGGCCTC ACCGGAGGCT TACACCGCTA TACCTTGGGG
GGATTTACCG ATCTCGCCTG CGCGATTTCC ACCACCGCTG AAGGTTTAAT TGGCGGCTTG
CTACACACCT ATTTGCTGCG CAAAGGCAAA GGGAAATTAC TGTTTAGCCC AAGTATTGTC
TTTGCGGTCA CCTTATTTGC CGAAATTGTG CAGATGTTGA TCATCTTGGT CGTGGCGAAA
CCGTTCGAAC AGTCTTATGC GCTGGTGTCC ACCATCGCCG CGCCAATGAT CATTGCTAAC
TCAGTCGGTG CCGCACTGTT TATGAGCATC CTGCTCGATC GCAAAACCAT TTTTGAAGAG
TATTCCGCGA CGTTTTCACG CCGCGCTCTG AATATTGCCG AGCGTTCTGT TGGTATCCTT
GCTGCCGGTT TTAACCCAGA AAATGCCAAC AAAATTGCCC GAATCGTGTA TGAACAGACC
AATGTCGGCG CGGTCTCGAT CACCGATCGC GAAAAAATCC TCGCCTTTGT CGGGATTGGC
GATGATCACC ATAAACCGAA TACACCGATC AGCTCGCAGA GCACGCTCGA TGCGATTAAT
CGCAACGCCA TCATCTATCT CGATGGCAAA GAGCATCCTT ATCAATGTTC TTTGTCTCCG
ACCTGCAAAC TGGGGTCTGC GTTAATCATT CCGTTGCGAG CAGGCGATCG GGTGATCGGC
ACCATCAAGC TCTACGAGCC AAAACGTAAG CTGTTTTCCA CCATCAATAT GTCGATGGCA
CAGGGTATCG CCCAACTGCT ATCCAGCCAA ATTCTGTATG GCGAATATCA GCAAAAACAA
ATCCTGCTCT CGCGGGCGGA AATCAAACTC CTGCAAGCGC AGGTTAATCC ACATTTTCTG
TTTAACGCAC TCAACACCAT CAGTGCGGTG ATCCGCCGTG AGCCAGATAA AGCCCGCGAG
CTGATTTTGC ATCTGTCGCA ATTTTTCCGC AGTAACCTCA AACAGAACGT CGAAACCGTC
ACTTTGCGTG AAGAGCTTGC CCACGTGAAC GCTTATCTCA CTATTGAAAA AGCGCGTTTT
AGTGACAGGC TCGATGTGGA AATTGCGATT GATGATGCCC TGCTAGAACG TAATGTCCCC
AGCTTCACTT TGCAGCCTTT GGTGGAAAAT GCCATCAAAC ACGGCACCTC TAACCTACTC
GAAGCTGGCA AAGTGCGCAT TTACAGTGAA ATGGTTGAAG GGGGAATGCG CGTCGTGGTG
GAAGACAACG CCGGGCTCTA TCAGCCTCCG AGTGAAGATT ATGATGGTTT AGGGATGCAA
ATTGTTGAAA AGCGCCTCAC CAACAAATTT GGTACAAAAT CAGGGCTACA GATTGAGGTC
GCGCCACAAG AGTACACGCG AATGAGCTTT GTCATTCCAC AGCAAGGCAC TTACTAA
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| Protein sequence | MDLILSLLQQ MCVYLVLAYM LSKTPIFIPL LNISGRFDHK ISVYVLFSLF CIMGTYFGLQ
INDAIANTRA IGAVMGGLFG GPVIGFAVGL TGGLHRYTLG GFTDLACAIS TTAEGLIGGL
LHTYLLRKGK GKLLFSPSIV FAVTLFAEIV QMLIILVVAK PFEQSYALVS TIAAPMIIAN
SVGAALFMSI LLDRKTIFEE YSATFSRRAL NIAERSVGIL AAGFNPENAN KIARIVYEQT
NVGAVSITDR EKILAFVGIG DDHHKPNTPI SSQSTLDAIN RNAIIYLDGK EHPYQCSLSP
TCKLGSALII PLRAGDRVIG TIKLYEPKRK LFSTINMSMA QGIAQLLSSQ ILYGEYQQKQ
ILLSRAEIKL LQAQVNPHFL FNALNTISAV IRREPDKARE LILHLSQFFR SNLKQNVETV
TLREELAHVN AYLTIEKARF SDRLDVEIAI DDALLERNVP SFTLQPLVEN AIKHGTSNLL
EAGKVRIYSE MVEGGMRVVV EDNAGLYQPP SEDYDGLGMQ IVEKRLTNKF GTKSGLQIEV
APQEYTRMSF VIPQQGTY
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