| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0204 |
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| Symbol | ptsP |
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| ID | 5135181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 208442 |
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| End bp | 210688 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640531664 |
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| Product | fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain |
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| Protein accession | YP_001216167 |
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| Protein GI | 147673679 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
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| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTCTC AGCTAAGGGA TATAGTAGAA CAAGTTTCAA AAGTCGAAGA CGTCTATCAG
GCGTTGGATA TTTTTGTAAA GCAGACCTGT GAGGCGATGA GCACAGAGTG TTGTACTGTC
TATTTAGCGA ATGAAGAGAT GCACCGTCTG GAATTGATGG CCACACAAGG TCTGAAGTTC
AAGGGCGATA AGATCCATAT TGATTTTGAT GAAGGCTTGG TCGGGTTGGT TAAACGTTCT
GCCGAACCGA TTAACTTAGC CGAAGCCTCA AAACATCCGA GCTTTAAATA TTTTAAGCAG
TTGGGTGAAG AGGTTTATCA CTCCTTCCTC GGTACACCGA TCATCTATCG CAAACAGGTG
CTTGGTGTGC TGGTGGTGCA GCAAAAATCT CCCCGTTTAT TTAGCGAGAT GGAAGTCTCC
TTTTTAGTTA CCCTTGCAGC GCAGCTCGCG GTGCTGGTGG CGCATGCTCA AACGCAAGGT
CACTGGCGTT TATCCAAAAA GCAGCAGGCC ATTACGGGTG TTGCCGCCTC TTCTGGGGTC
GCGATTGGTG AGTTTTGGTG GGATGATACC CAGCCAGATC TGTCCGAAGT GCTACCCGCC
TCAGCTCTGG ATCCTGATTT TGAGCAAGAG CGTATTGCCT TGGCAGTAGA GAGTGCGCTG
GCCGATTTTC GTCGGATGCG TAAAAAGCTC GATGGGGATA TCAACAAAGA AGCGTTAGCC
ATTTTTGATC TGTTCACTCA CTTATTGAAC GATCCTATGC TGCGGAAAGA TCTCAAAGCG
CAGATCCAAA AAGGGGATCG TGCCGATTGG GCGCTGCGCC AAGTGGTCGA AAGTTACTCG
AACCGTTTTG CGCGCATGTC GGATGTTTAT CTGCGAGAGC GAGCGCAAGA CATTCGTGAG
TTAGGACAAC GTTTACTGTT TTTCTTGCTC AATACCGAAA CCAATCAGCC CAAAATCGAT
AAGCCGGTTA TCTTGGTGGT GCGAGAGCTG ACCGCGAGCG TGTTAGCCGC ACTGCCCAAA
GATAAGCTGC TGGCTGTCGT CTCTCTTGAA GGCGCGGCCA ACTCCCATGC GGCTATTTTG
TCGCGCGCGT TAGGCATTCC TGCGGTGATG GGGGTATCGA TTAACCTGCG CGATCTGAAT
GGCAAAAAAG GTATTGTCGA TGGCTACAGC GGTAAGTTAT TCATTTCGCC TTCGAAAACC
ATTCTGAATG AGTATCGTGC CTTAGCGAAT GAAGAGCGTG AGCTGTCGCG CATGGTCAAT
GAGGCGATTC GTGAGCCCGC ATGTACTCTT GATGGCGCAC GAATCGAATT GTTACTGAAT
GCCGGTTTGA GTGCCGATAC CAGTATTGCC GTCAATCAAG GGGTGGATGG CGTTGGGTTG
TATCGCACAG AAATCTCTTT CTTACTGCAG CACCGATTTC CCTCAGAAGA GGAGCAGACT
CAGCAATATC GGCATGTGCT GAACACTTAC CCTCATCAAC GTGTTGTTAT GCGTACGCTC
GATATCGGTG GTGATAAGCC TTTACCTTAC TTGCCGATTG AAGAAGACAA CCCATTTCTC
GGTTGGCGTG GTATCCGTTT TACCTTAGAT CATCCTGACA TTTTTATTAT CCAACTGCGC
GCCATGCTCA GAGCAAGTGC GGAGTCGGGG AATTTATCCA TCTTGCTGCC GATGATTTCC
GGTGCCAAAG AGCTGGATGA TGCGCTGAAG TTTATCTATC AAGCCTATCA AGAAGTTTCG
CAACAAGATC CACGCGTGGT GATGCCGCAA ATCGGGATCA TGCTCGAAGT ACCTTCGATG
CTATATCTGC TGCCACTGAT TGCCGATAAA ATTGATTTCG TCTCTGTCGG TACAAACGAT
TTGACCCAAT ATCTGCTTGC CGTGGATCGT AACAATGCGC GTGTGGCGGA TGTGTATGAA
TCTATGCATC CTGCGGTGGT GATGGCACTG AAGCAGATCC AACAGACTTG TGCGACCCAT
CAAATACCCG TGTGTGTCTG TGGTGAGTTA GCCGGAGATC CGATTGGTGC TTTGCTGTTG
ATAGGGTTAG GCTACACCAC CTTAAGTATG AACACGTCTA ACGTCGCTAA AGTGAAATAT
CTAGTGCGAC ACTCTGAACT GGCGGAATTA ACCCAGCTCG CTGAGCAGGC ATTAACCCAA
CCTTATGGAC GAGAAATCTA CAATATGATG CTCGCCTATA TCGAAAAACA CGGTTTTGCA
GGTTTTGTCC GTGCAGGCAA AAAATAG
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| Protein sequence | MLSQLRDIVE QVSKVEDVYQ ALDIFVKQTC EAMSTECCTV YLANEEMHRL ELMATQGLKF
KGDKIHIDFD EGLVGLVKRS AEPINLAEAS KHPSFKYFKQ LGEEVYHSFL GTPIIYRKQV
LGVLVVQQKS PRLFSEMEVS FLVTLAAQLA VLVAHAQTQG HWRLSKKQQA ITGVAASSGV
AIGEFWWDDT QPDLSEVLPA SALDPDFEQE RIALAVESAL ADFRRMRKKL DGDINKEALA
IFDLFTHLLN DPMLRKDLKA QIQKGDRADW ALRQVVESYS NRFARMSDVY LRERAQDIRE
LGQRLLFFLL NTETNQPKID KPVILVVREL TASVLAALPK DKLLAVVSLE GAANSHAAIL
SRALGIPAVM GVSINLRDLN GKKGIVDGYS GKLFISPSKT ILNEYRALAN EERELSRMVN
EAIREPACTL DGARIELLLN AGLSADTSIA VNQGVDGVGL YRTEISFLLQ HRFPSEEEQT
QQYRHVLNTY PHQRVVMRTL DIGGDKPLPY LPIEEDNPFL GWRGIRFTLD HPDIFIIQLR
AMLRASAESG NLSILLPMIS GAKELDDALK FIYQAYQEVS QQDPRVVMPQ IGIMLEVPSM
LYLLPLIADK IDFVSVGTND LTQYLLAVDR NNARVADVYE SMHPAVVMAL KQIQQTCATH
QIPVCVCGEL AGDPIGALLL IGLGYTTLSM NTSNVAKVKY LVRHSELAEL TQLAEQALTQ
PYGREIYNMM LAYIEKHGFA GFVRAGKK
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