Gene VC0395_A0200 details

Gene Information

• Locus tag: VC0395_A0200
• Symbol: mutH
• ID: 5135740
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: -
• Start bp: 206625
• End bp: 207290
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 640531660
• Product: DNA mismatch repair protein
• Protein accession: YP_001216163
• Protein GI: 147673814
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3066] DNA mismatch repair protein
• TIGRFAM ID: [TIGR02248] DNA mismatch repair endonuclease MutH

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 0.725657
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACCAG CACCGACGAC TCAACAAGAA TTACTCACGC GAGCCCAACA AATTGCAGGG 
CTGAGTTTTG CTGAACTCGC CGATGAAGCA GGCATGACCG TACCGCCAGA TCTGCGTAAA 
GACAAAGGCT GGGTAGGCCA GTTACTGGAA TGGCACTTAG GGGCGACAGC AGGCAGTCGT 
CCACAACAAG ATTTTGAACA TCTTGGGATT GAGTTAAAGA GCATTCCCAT CAGTTACACC 
GGAAAACCGT TGGAGACCAC TTTCGTTTGC GTCGCCCCAC TCACCGGAGT TCATGGCTTA 
ACATGGGAGC AAAGTCATGT GCGCAATAAG CTCTCTAAGG TGCTCTGGAT CCCGGTACAA 
GGTGAGCGCG AGATCCCGCT CGCTGAGCGC TGTGTGGGCT ATCCTTTGCT ATGGAGCCCT 
TCTCCCGAAG AGGAAGCGCA GCTCAAAGCG GACTGGGAAG AGTTAATGGA ATTGATTGTG 
CTAGGTAAAG TAGCACAAAT TACCGCTAAA CACGGTGAAG TGCTGCAACT GCGCCCTAAA 
GCCGCCAATG GTCGAGCGCT CACTGAAGCC TATGGAGCCA ATGGACGCCC AATCAAAACC 
CTGCCACGTG GTTTTTATCT GCGTACCCAA TTTACTGCGC AAATTCTGCA GCGCTATTAC 
GCCTAG 

 

Protein sequence

MKPAPTTQQE LLTRAQQIAG LSFAELADEA GMTVPPDLRK DKGWVGQLLE WHLGATAGSR 
PQQDFEHLGI ELKSIPISYT GKPLETTFVC VAPLTGVHGL TWEQSHVRNK LSKVLWIPVQ 
GEREIPLAER CVGYPLLWSP SPEEEAQLKA DWEELMELIV LGKVAQITAK HGEVLQLRPK 
AANGRALTEA YGANGRPIKT LPRGFYLRTQ FTAQILQRYY A