Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0200 |
Symbol | mutH |
ID | 5135740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | - |
Start bp | 206625 |
End bp | 207290 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640531660 |
Product | DNA mismatch repair protein |
Protein accession | YP_001216163 |
Protein GI | 147673814 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3066] DNA mismatch repair protein |
TIGRFAM ID | [TIGR02248] DNA mismatch repair endonuclease MutH |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.725657 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCAG CACCGACGAC TCAACAAGAA TTACTCACGC GAGCCCAACA AATTGCAGGG CTGAGTTTTG CTGAACTCGC CGATGAAGCA GGCATGACCG TACCGCCAGA TCTGCGTAAA GACAAAGGCT GGGTAGGCCA GTTACTGGAA TGGCACTTAG GGGCGACAGC AGGCAGTCGT CCACAACAAG ATTTTGAACA TCTTGGGATT GAGTTAAAGA GCATTCCCAT CAGTTACACC GGAAAACCGT TGGAGACCAC TTTCGTTTGC GTCGCCCCAC TCACCGGAGT TCATGGCTTA ACATGGGAGC AAAGTCATGT GCGCAATAAG CTCTCTAAGG TGCTCTGGAT CCCGGTACAA GGTGAGCGCG AGATCCCGCT CGCTGAGCGC TGTGTGGGCT ATCCTTTGCT ATGGAGCCCT TCTCCCGAAG AGGAAGCGCA GCTCAAAGCG GACTGGGAAG AGTTAATGGA ATTGATTGTG CTAGGTAAAG TAGCACAAAT TACCGCTAAA CACGGTGAAG TGCTGCAACT GCGCCCTAAA GCCGCCAATG GTCGAGCGCT CACTGAAGCC TATGGAGCCA ATGGACGCCC AATCAAAACC CTGCCACGTG GTTTTTATCT GCGTACCCAA TTTACTGCGC AAATTCTGCA GCGCTATTAC GCCTAG
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Protein sequence | MKPAPTTQQE LLTRAQQIAG LSFAELADEA GMTVPPDLRK DKGWVGQLLE WHLGATAGSR PQQDFEHLGI ELKSIPISYT GKPLETTFVC VAPLTGVHGL TWEQSHVRNK LSKVLWIPVQ GEREIPLAER CVGYPLLWSP SPEEEAQLKA DWEELMELIV LGKVAQITAK HGEVLQLRPK AANGRALTEA YGANGRPIKT LPRGFYLRTQ FTAQILQRYY A
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