| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0195 |
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| Symbol | lysS |
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| ID | 5135585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 201361 |
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| End bp | 202899 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531655 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001216158 |
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| Protein GI | 147674731 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00927236 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAATGA CTGATGCTGT TCAAAACGAG ATTAATCAAG AGCAAATCGC GCAAGAAGAA
AACAAACTGA TTGCAGAGCG TCGCAGCAAG TTGGATCACA TCCGCAAGAA CTGTAAAGCA
AACGGGCACC CAAACTCGTT CCGTCGCGAC AGCCTAGCGG GTGATCTGCA GAAGAAGTTC
GGTGAAAAGA GTAAGGAAGA ACTGGAAGCG CTCAATCACG TGGTGTCTAT CGCTGGTCGT
GTGATGGCAA AACGTGGCCC ATTCTTGGTG ATTCAAGAAA CCTCTGGCCG CATTCAGGCT
TATGCATCGA AAGAAGTGCA ACAAGAGCTG AAAGACAAAT ACCAAGGTTT GGATATCGGT
GACATCATCG GTGTGCAAGG TGCCCTGCAC AAATCCGGTA AAGGCGATTT GTACGTCAAC
ATGGAGCAAT TCCAACTGCT GACCAAAGCA CTGCGCCCGC TGCCAGAGAA ATTCCACGGT
CTGACTGACC AAGAAATGCG TTACCGCCAG CGTTACGTTG ACCTGATCGT CAACGAAAAC
TCTCGCAACG CTTTCATTGT ACGTTCTAAG GTGATGTCAG CCATTCGTAA CTTCATGATC
TCAAAACAGT TCATGGAAGT GGAAACGCCG ATGATGCACG TGATCCCTGG TGGTGCGAGT
GCGCGCCCAT TCATCACGCA CCACAACGCG CTCGACATGC CGATGTACCT GCGTATCGCG
CCTGAGCTGT ACCTGAAGCG TCTGGTTGTC GGTGGTTTTG ATCGTGTATT CGAAATCAAC
CGTAACTTCC GTAACGAAGG TCTTTCTCCA CGTCACAACC CAGAATTCAC CATGATGGAA
TTCTATATGG CGTACGCGGA CTACAAAGAT CTGATGGATC TGACGGAAGA GCTGCTCAGC
TCTGTGGCGT TAGAAGTTCT CGGTTCAACC TCCATGCCTT ACGGTGAGCA TACCGTTGAA
TTTGGTGGTA AATACGCGCG TATGAGCATG TTTGATGCGA TCAAGCACTA CAACCCAAAT
CACGCGCAGA TCCAAGCTCT GACCGAAGAA GACATCCAAA ACCGTGACCT AATGGTTTCT
ATCGCGAAAT CCGTTCACGT TGATGTGGAG CCTTTCTGGA CCTGTGGTCA GCTTCTCGAA
GAGATCTTTG GTGAAACGGC TGAGCCGAAA CTGATGCAGC CAACTTTCAT CACTGGCTAC
CCAGCAGATA TCTCTCCACT GGCACGTCGT AGCGATGACA ACCCGTTCTT CACTGACCGC
TTTGAGTTCT TCATCGGTGG CCGTGAAGTG GCAAACGGCT TCTCAGAGCT GAACGATGCT
GAAGACCAAG ATGCGCGTTT CAAAGCCCAA GTGGAAGCGA AAGAGTCTGG TGATGATGAA
GCCATGTTCT ATGATGCCGA CTACATTACC GCTTTAGAGC ACGGCTTACC GCCAACAGCG
GGTCAAGGTA TTGGTATTGA TCGTCTGGTT ATGCTCCTGA CCAATACTCA CACTATCCGT
GATGTGATTT TGTTCCCAGC GATGCGCCCT CAGCAATAA
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| Protein sequence | MQMTDAVQNE INQEQIAQEE NKLIAERRSK LDHIRKNCKA NGHPNSFRRD SLAGDLQKKF
GEKSKEELEA LNHVVSIAGR VMAKRGPFLV IQETSGRIQA YASKEVQQEL KDKYQGLDIG
DIIGVQGALH KSGKGDLYVN MEQFQLLTKA LRPLPEKFHG LTDQEMRYRQ RYVDLIVNEN
SRNAFIVRSK VMSAIRNFMI SKQFMEVETP MMHVIPGGAS ARPFITHHNA LDMPMYLRIA
PELYLKRLVV GGFDRVFEIN RNFRNEGLSP RHNPEFTMME FYMAYADYKD LMDLTEELLS
SVALEVLGST SMPYGEHTVE FGGKYARMSM FDAIKHYNPN HAQIQALTEE DIQNRDLMVS
IAKSVHVDVE PFWTCGQLLE EIFGETAEPK LMQPTFITGY PADISPLARR SDDNPFFTDR
FEFFIGGREV ANGFSELNDA EDQDARFKAQ VEAKESGDDE AMFYDADYIT ALEHGLPPTA
GQGIGIDRLV MLLTNTHTIR DVILFPAMRP QQ
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