| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0194 |
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| Symbol | prfB |
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| ID | 5136070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 200437 |
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| End bp | 201336 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640531654 |
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| Product | peptide chain release factor 2 |
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| Protein accession | YP_001216157 |
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| Protein GI | 147673826 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1186] Protein chain release factor B |
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| TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.109294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATACCA TCGATCAACT GGATCGTGGT GTCGATGATG TCGAAGGTCT ACTAGAACTG
GCCATCGAAG CGGAAGATCA AGAAACGTTT GATGAAATTG GTCCTGAATT GGATGAGCTA
GAAGCGAAGC TTGAACAGCT CGAATTCCGC CGCATGTTCT CTGGCGATCA CGATTCTTCC
GATTGCTACC TTGACCTACA AGCCGGCTCT GGCGGTACAG AAGCGCAAGA TTGGACGTCG
ATGCTGCTGC GCATGTACTT GCGCTGGGCA GATGCTAAAG GCTTTAAAAC CGAAGTGATT
GAAGTGTCGG AAGGCGACGT AGCAGGATTG AAATCTGCGA CAGTGCGTAT CATTGGTGAT
TACGCTTATG GTTGGCTACG TACTGAAACC GGTGTACACC GTCTAGTGCG TAAATCACCG
TTCGATTCAG GTGGCCGCCG TCATACGTCG TTTGCTTCGG CGTTTATCTA CCCTGAAGTA
GATGAAAACA TAGATATCGA AATTAACCCT GCCGATCTGC GTATAGACGT GTATCGTGCT
TCTGGTGCCG GTGGTCAGCA CGTTAACACC ACCGAATCGG CGGTACGTAT CACTCACGTA
CCGACCAATA CGGTCGTGCA GTGTCAAAAC GATCGCTCAC AGCACAAAAA CAAAGACCAA
GCGATGAAGC AACTTCGCGC CAAACTGTTT GAATTGGAGC TGCAAAAGCA GAACGCCGAG
AAACAGGCTA ACGAAGATGC TAAATCCGAC ATTGGTTGGG GTAGCCAAAT CCGTTCTTAC
GTGTTGGATG ATTCACGAAT CAAGGATTTA CGTACAGGTA TTGAAAACCG CAACACGCAA
GCGGTACTCG ATGGTGACTT AGACAAATTT ATCGAAGCTA GCCTGAAATC AGGCCTGTAA
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| Protein sequence | MDTIDQLDRG VDDVEGLLEL AIEAEDQETF DEIGPELDEL EAKLEQLEFR RMFSGDHDSS
DCYLDLQAGS GGTEAQDWTS MLLRMYLRWA DAKGFKTEVI EVSEGDVAGL KSATVRIIGD
YAYGWLRTET GVHRLVRKSP FDSGGRRHTS FASAFIYPEV DENIDIEINP ADLRIDVYRA
SGAGGQHVNT TESAVRITHV PTNTVVQCQN DRSQHKNKDQ AMKQLRAKLF ELELQKQNAE
KQANEDAKSD IGWGSQIRSY VLDDSRIKDL RTGIENRNTQ AVLDGDLDKF IEASLKSGL
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