| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0183 |
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| Symbol | |
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| ID | 5135636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 187029 |
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| End bp | 188042 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640531643 |
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| Product | putative protease |
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| Protein accession | YP_001216146 |
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| Protein GI | 147673781 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTTC TCTGTCCGGC CGGAAATTTG CCGGCCCTGA AAACAGCGAT TGATTGTGGT
GCCGATGCGG TTTATATCGG TTTCAAAGAT GATACCAACG CTCGCCACTT TGCCGGCCTT
AATTTTAGCG GCAAAAAGCT CGAAAAAGCG GTGGATTACG TGCACGACCA CAATAAAAAA
ATTCATATTG CACTCAACAC CTTCGCCCAT CCTAATGGTT TCGAGCGCTG GACTAACGCG
GTAGATCAAG CGGCCGATCT CGGGGTTGAT GCCTTGATCA TTGCCGATAT TGCCGTGCTG
GAGTATGCGG CGCGCCACTA CCCACACCTT GAACTGCACC TTTCCGTGCA AGCATCAGCC
ACCAACGTGA AAGCCGTTGA ATTTTATCAT CAGAATTTTA ACGTCAAACG TGTCGTTCTG
CCGCGCGTGC TTTCCATTCA TCAGGTGAAG CAGCTTTCGC GTAATATTCC ACAAGGTGTC
GAGCTGGAAG TGTTCGCTTT TGGCAGCTTG TGCATCATGT CGGAAGGCCG CTGTTATCTC
TCCTCTTACA TGACGGGTGA GTCGCCTAAT ACGGTTGGAG CTTGCTCTCC CGCCAAATAT
GTACGCTGGC AAGAGACAGA ATCAGGGCTT GAATCTCGCT TGAACGAAAT TTTGATTGAT
AAGTATGCGG CGGGGGAAAA TGCAGGTTAT CCAACCCTGT GTAAAGGGCG CTTCATCACG
GATATTGAAG GTGAACGAAA GTGCTATCAC GCTCTTGAAG AGCCAACCAG TTTAAATACC
TTGTCACTGC TGCCAGAGCT GTTTGCCGCC AATGTGGCTT CAGTAAAAAT TGAGGGGCGT
CAACGAAGCC CTGCGTATGT CGAACAAGTC ACCCGCACTT GGCGTGCCGC GATTGATCGC
TACTTAGCCA ATCCTGCGCA ATACCATGTC GAACCCAAAT GGAATGCGGC ACTGGCCAAT
GTCTCAGAAG GTACCCAAAC CACACTTGGT GCCTATCACC GTCAATGGCA ATAA
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| Protein sequence | MELLCPAGNL PALKTAIDCG ADAVYIGFKD DTNARHFAGL NFSGKKLEKA VDYVHDHNKK
IHIALNTFAH PNGFERWTNA VDQAADLGVD ALIIADIAVL EYAARHYPHL ELHLSVQASA
TNVKAVEFYH QNFNVKRVVL PRVLSIHQVK QLSRNIPQGV ELEVFAFGSL CIMSEGRCYL
SSYMTGESPN TVGACSPAKY VRWQETESGL ESRLNEILID KYAAGENAGY PTLCKGRFIT
DIEGERKCYH ALEEPTSLNT LSLLPELFAA NVASVKIEGR QRSPAYVEQV TRTWRAAIDR
YLANPAQYHV EPKWNAALAN VSEGTQTTLG AYHRQWQ
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